Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485940

Identifier: 103485940

GI number: 103485940

Start: 457723

End: 458871

Strand: Reverse

Name: 103485940

Synonym: Sala_0447

Alternate gene names: NA

Gene position: 458871-457723 (Counterclockwise)

Preceding gene: 103485941

Following gene: 103485939

Centisome position: 13.72

GC content: 70.67

Gene sequence:

>1149_bases
ATGATACGGACCGTCTCGATCACCCTGGCTCTGGTCATCGGACTTGCCGGCTGCGCGGCGAACGGGGAGGATGCGGCCGG
TCTGCAAGCCGCCGACCTTCGCTTCGAGGACGGGCCGCGCCTCGGCGCGCCGCGGGCTGCCCATCAACTGATCGCGACCG
CGGACGGCAAGCTGCTGGCCATTGGCGGATGTGTGCGCTCGGGGTGCGACGTCGGCCCCGCCAGCGCAACCGTCGACATC
ATCGATGCGGCAAGCATGGCGCTGATCGGCAGTGGCCGCCTGCTCGCCGCGCATGTCCAGCCATCGGCCGTCGCGCTGCG
CGACGGCCGGGTGCTGATCACGGGCGGCTGGATCGACGGGCGCCCGGCCACGGCGATCGAGATATTCAACCCCGCAACGG
GCAGGTCGGTCGCGGGACCGGCGCTCGGCGGACCCCGCGCCAATCCCGCCGTCGTGGGGCTTGCCGACGGACGCGTCCTG
ATCGCCGGTGGTTATGACGGCCAGGATGCGCTCGGCGATGCGCTGATCTTCGATCCCGCCAGTGGAACGCTGTCGGCGAC
GGGCAGGCTGGTCACGCCGCGCGCCGGGGCCAGCGCCACCCTGCTGTCCGATGGCCGGGTGCTGTTGGTTGGTGGCGGCC
GTGCCGAACGGAGCCCCCGGATCGCGCTCGCGAGCGCGGAAATCTTCGATCCGGCCACGGGGCGATTCGAGGCGGCCGGG
TCGCTGGCCCAGGGACGCTACAAGCATGGCGCGCTCCGGCTCGACAATGGCGACGTGCTGATCGTCGGCGGCGCCACTGA
ACGCGATTCCGCCGGGAAACTGCGTTCGGTCGAACGGTTCGACGCGGCCACGGGCCGCTTCGTGGTTGCGGGGCAATTGC
TCGCCGGACGCTACAAGCTGGCCGATGCCCTGCTGCTACTGCCGGGCAACCGCGTGCTCGTGGCGGCGGACGACATGGCG
CCCGAGATTTTCGATGTCGCGCGCGGCCGGAGCAGCCGGGTCGATTACGATCTGGGCGAGCGCTGGAACTTCATGGCGAT
GGTCCGTGTCGATTCGCGGCGGGCCCTGCTCGCCGGCGGCTACAGCGAAAAGGGGATCGACCCGACCGATCGAAGCTGGG
TCATCCATCTGCCCACGGGGGCGTCGTGA

Upstream 100 bases:

>100_bases
GCACGCTCGCCGAGCATAACGCCAATGTGCAGAAATGGTATGCGCTCCGCCGCGAACGGGGAGAGATGTAAGGCGCAACA
CAGAAAGCAGAGGGAGAATC

Downstream 100 bases:

>100_bases
CGACCGCCAAGCTCTTTCTGCACGGTGTGCCCGACAGCCCGGCGATCTGGCGCCCTCTGCTCGCCGCGCTCGATCTCGGC
GGCACGCCCGTCGCGGTTCC

Product: kelch

Products: NA

Alternate protein names: Kelch Domain-Containing Protein; Kelch Domain Protein; Lipoprotein; NHL Repeat Containing Protein; Transposase; Kelch Motif-Containing Protein; Kelch Repeat Type 1-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Ig Domain Domain Protein; Kelch Related Protein

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MIRTVSITLALVIGLAGCAANGEDAAGLQAADLRFEDGPRLGAPRAAHQLIATADGKLLAIGGCVRSGCDVGPASATVDI
IDAASMALIGSGRLLAAHVQPSAVALRDGRVLITGGWIDGRPATAIEIFNPATGRSVAGPALGGPRANPAVVGLADGRVL
IAGGYDGQDALGDALIFDPASGTLSATGRLVTPRAGASATLLSDGRVLLVGGGRAERSPRIALASAEIFDPATGRFEAAG
SLAQGRYKHGALRLDNGDVLIVGGATERDSAGKLRSVERFDAATGRFVVAGQLLAGRYKLADALLLLPGNRVLVAADDMA
PEIFDVARGRSSRVDYDLGERWNFMAMVRVDSRRALLAGGYSEKGIDPTDRSWVIHLPTGAS

Sequences:

>Translated_382_residues
MIRTVSITLALVIGLAGCAANGEDAAGLQAADLRFEDGPRLGAPRAAHQLIATADGKLLAIGGCVRSGCDVGPASATVDI
IDAASMALIGSGRLLAAHVQPSAVALRDGRVLITGGWIDGRPATAIEIFNPATGRSVAGPALGGPRANPAVVGLADGRVL
IAGGYDGQDALGDALIFDPASGTLSATGRLVTPRAGASATLLSDGRVLLVGGGRAERSPRIALASAEIFDPATGRFEAAG
SLAQGRYKHGALRLDNGDVLIVGGATERDSAGKLRSVERFDAATGRFVVAGQLLAGRYKLADALLLLPGNRVLVAADDMA
PEIFDVARGRSSRVDYDLGERWNFMAMVRVDSRRALLAGGYSEKGIDPTDRSWVIHLPTGAS
>Mature_382_residues
MIRTVSITLALVIGLAGCAANGEDAAGLQAADLRFEDGPRLGAPRAAHQLIATADGKLLAIGGCVRSGCDVGPASATVDI
IDAASMALIGSGRLLAAHVQPSAVALRDGRVLITGGWIDGRPATAIEIFNPATGRSVAGPALGGPRANPAVVGLADGRVL
IAGGYDGQDALGDALIFDPASGTLSATGRLVTPRAGASATLLSDGRVLLVGGGRAERSPRIALASAEIFDPATGRFEAAG
SLAQGRYKHGALRLDNGDVLIVGGATERDSAGKLRSVERFDAATGRFVVAGQLLAGRYKLADALLLLPGNRVLVAADDMA
PEIFDVARGRSSRVDYDLGERWNFMAMVRVDSRRALLAGGYSEKGIDPTDRSWVIHLPTGAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39056; Mature: 39056

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTVSITLALVIGLAGCAANGEDAAGLQAADLRFEDGPRLGAPRAAHQLIATADGKLLA
CEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEEEECCCCEEE
IGGCVRSGCDVGPASATVDIIDAASMALIGSGRLLAAHVQPSAVALRDGRVLITGGWIDG
EECHHHCCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCEEEEECCEEEEECCCCCC
RPATAIEIFNPATGRSVAGPALGGPRANPAVVGLADGRVLIAGGYDGQDALGDALIFDPA
CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHCCCEEEEECC
SGTLSATGRLVTPRAGASATLLSDGRVLLVGGGRAERSPRIALASAEIFDPATGRFEAAG
CCCEECCCEEECCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCC
SLAQGRYKHGALRLDNGDVLIVGGATERDSAGKLRSVERFDAATGRFVVAGQLLAGRYKL
CHHCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHCCEEE
ADALLLLPGNRVLVAADDMAPEIFDVARGRSSRVDYDLGERWNFMAMVRVDSRRALLAGG
EEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECC
YSEKGIDPTDRSWVIHLPTGAS
CCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MIRTVSITLALVIGLAGCAANGEDAAGLQAADLRFEDGPRLGAPRAAHQLIATADGKLLA
CEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEEEECCCCEEE
IGGCVRSGCDVGPASATVDIIDAASMALIGSGRLLAAHVQPSAVALRDGRVLITGGWIDG
EECHHHCCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCEEEEECCEEEEECCCCCC
RPATAIEIFNPATGRSVAGPALGGPRANPAVVGLADGRVLIAGGYDGQDALGDALIFDPA
CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHCCCEEEEECC
SGTLSATGRLVTPRAGASATLLSDGRVLLVGGGRAERSPRIALASAEIFDPATGRFEAAG
CCCEECCCEEECCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCC
SLAQGRYKHGALRLDNGDVLIVGGATERDSAGKLRSVERFDAATGRFVVAGQLLAGRYKL
CHHCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHCCEEE
ADALLLLPGNRVLVAADDMAPEIFDVARGRSSRVDYDLGERWNFMAMVRVDSRRALLAGG
EEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECC
YSEKGIDPTDRSWVIHLPTGAS
CCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA