Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485913

Identifier: 103485913

GI number: 103485913

Start: 427812

End: 428060

Strand: Reverse

Name: 103485913

Synonym: Sala_0420

Alternate gene names: NA

Gene position: 428060-427812 (Counterclockwise)

Preceding gene: 103485915

Following gene: 103485912

Centisome position: 12.8

GC content: 59.44

Gene sequence:

>249_bases
ATGAATTCTGATCCGCCGGTTTGGGAGGAAGTCCGTCAGGGCTTCCTCCTTTCCTTTTGCTCGCAGACCGTTTCAGCATC
ACTCAGCCGGAACGTGAAGGCGGGTCGCAAGCGTCAGTCGGGGGTATCGGAACGGTCGAGATCGGTGAGCCGCTCCGGCA
TATCCAGGACCTTCAATGCCGCGGCCTCGATTGCCTCTGCCTGCGTCGGGAAAGCCTCGGAAGAACTGATCGAAACCCCG
TTCGGGTAA

Upstream 100 bases:

>100_bases
GACGAGGCAGGATACATCGCGGTCGATGAAGGAGATTACGGTGCCTTGCCCAAGGCCATGCTGGACCGTGTCATCGACAC
CGTGGCGGGCCGTCTCAGCG

Downstream 100 bases:

>100_bases
GTGACTGTCGCCTGGAAGCCGTTGCCCTTCGGTGTCGCACTCAATGTGACCTGGCCCATGCCGCGCCTCCCTGCTGCCCT
CATTAAATGCCCCCATCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MNSDPPVWEEVRQGFLLSFCSQTVSASLSRNVKAGRKRQSGVSERSRSVSRSGISRTFNAAASIASACVGKASEELIETP
FG

Sequences:

>Translated_82_residues
MNSDPPVWEEVRQGFLLSFCSQTVSASLSRNVKAGRKRQSGVSERSRSVSRSGISRTFNAAASIASACVGKASEELIETP
FG
>Mature_82_residues
MNSDPPVWEEVRQGFLLSFCSQTVSASLSRNVKAGRKRQSGVSERSRSVSRSGISRTFNAAASIASACVGKASEELIETP
FG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8766; Mature: 8766

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDPPVWEEVRQGFLLSFCSQTVSASLSRNVKAGRKRQSGVSERSRSVSRSGISRTFNA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AASIASACVGKASEELIETPFG
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSDPPVWEEVRQGFLLSFCSQTVSASLSRNVKAGRKRQSGVSERSRSVSRSGISRTFNA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AASIASACVGKASEELIETPFG
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA