| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is cyaA [H]
Identifier: 103485848
GI number: 103485848
Start: 364116
End: 366215
Strand: Reverse
Name: cyaA [H]
Synonym: Sala_0353
Alternate gene names: 103485848
Gene position: 366215-364116 (Counterclockwise)
Preceding gene: 103485849
Following gene: 103485847
Centisome position: 10.95
GC content: 67.1
Gene sequence:
>2100_bases ATGAACGCGCCCGAAACCCCGGTTCGCGCGGCGGAAGCGGTCACGCCCGATGACGCGGACGGCCGCCCGCCCACCGTCCC GCTCGCCAAGCGTGTCCGCCGGCTCGTCACGCAGCTTGGCCCGTCGCGCATGGTGGCGACGATCCTCTTCCTGGTCCTGG CGGTGCTGATCGCGCGCTTCAGCTGGCAGATGCCGCTGATCAACGCCGCCGAACGCGCTCTTTACGATGCGCGCGCGACG CTGATGGCGCCGAAGGTTCAGCAGGACCCGCGCATCCTGCTCGTCACCTATAATGACGAGACGCTGTTCAACACCGGCAT CCGATCGCCGCTCGACCGCTCGCTGCTGACCGCCGCGCTCGCCAATATCGACCAGATGGGGGCCAAAGCGATCGGCATCG ACATCGCCTTCGATTCGCCGCGCCCCGACGACGCGGCGCTGAAGGCGCAATTGCGCGCGATGCAGACGCCGACCTGGCTC GCCTATGCCGAACAGGCGAGCAACCCGAACACCATCTTCTACGAACAACAGAAGTTCCTCGAATCCTTCATCGCCGACGT CGCGACCGCCCGGACCCGGCCGACAAGCGTGCTGTTCCATACCGACGACGACAGCGTGATCCGCCGCTGGCCCGACCGAC CGGCGGGCCTGCCGCCGCTGATGGCCAATGCGCTCGCGCCGGTCGATCCGGCTCATGCCGGTTATCGGGGCGCGATCCGC TTCCTCGTTCCCGCGCGCGCCGGCGGCGGTCAGGTCGAGCCGGTGTTCGCCAACATTCCCATCGACAGCTTTGCGCTGCC GATGGACGCCGCCATGCGCGCCGGTTTTTCGGAGCTGGTGAAGGATCGCTATGTGCTCATCGGCGGCGACATCATCGACA ATGACCAGTTCAACACGCCGCTCAGTCGCTTTCCCGACGCGATCACCGGCCAGCATGAAACGATGATCGGTCTGGAGGTT CACGCCCATATGCTCGCTCAGCAGCTCGATGGCGCGTGGGCGCGGCCGCTCGCCGGGCCGACGCTGTGGGTGCTTGCGCT GCTCGTCGTGCTTGCGGGCGGACTCACCAGCCTCATCGACATGCGCGCGCGCTGGGTCGCGCTCGCCTTCCTTGGCCAGA TGGCCTTTTTCGTCGCCTTTCCCTTCTGGCTCCAGGGACGCGGGATCGACACGACGACGCTGCCGACCTTCGGCTGGGCG GTCGGCTGGCTGTTCGGCTATGCCGCGGTCGGCACCGCCGCGCGCACCATCGGATCACGCCAGCGCGCCTTTGCGCAATC GGCGCTCGGCAAATATCTTCCCGCCGATGTCGCCGAACAGATCATGCGCGACCCCGACCAGCTTTCGCTCCACGGCGAAC GGCGCAACATCTTCTGCGTCTTCACCGACCTCGAAGGCTTCACCAAATTGAGCCATGCGGTGACGCCGGAAACCGTCGCG CGGCTGCTCAACGAATATCTCGACCGTTTGTCGGACATCGTGCTGGCGCATGGCGGCACGATCGACAAGTTCGTCGGCGA CGCGGTGGTCGCCTTCTGGGGCGCGCCGATCAGCCGCCCCGACGATGGCGAAAAGGCGGCGACGGCAGCGCTTGCCATGT ATCAGGCGGGGGAGCGGTTCCGCGTCGACCTCGCCGCCGGGGATATCCCCCCGATCGGCATGACGCGCGTCGGGCTGCAC GTCGGCGACGCGATCGTCGGCAATTTCGGCGGCGAAGGGCGCATCCAGTATACCGCGCTCGGCGACAGCATGAACACCGC GTCGCGGCTCGAGGCGGCGAACAAGAGCCTCAAGACCGGCGTGCTCATCTCGGCCGAGGCGGCGGCGCGGTCGGGCCGCG ACGATCTGGTGCCGATGGGCCGCGTCACGTTGCGCGGCCGCGCGCAGCCCGTCGACGTTTTCACCCCGCGTCCCGATCTG GCACCGGATCAGCGCGGCCGCATCGCCGCGCTTGTCGCCGCGCACGGCGCCGGGGATAATGACGCCTGTGTGACGCTGGC CACAGAATTGGCGCAAGAATTGAGACAGGATGCCGCCATCCAGTTCCTGATCGAACGCCTGAACCAGACGAAAAGAGGAG AAAGCTATGTCCTTTCCTGA
Upstream 100 bases:
>100_bases GCGGGCTTCGCGATCATCGGCGACGGTGCGCAGCCGCTGCTTCGCGGCGCGCAAACGGCGCGGCACGGACAGGCGGCCGG CCGCGCCGCGCGCTGATCCG
Downstream 100 bases:
>100_bases CTTGCCGATGCGCCGCATCGGTCTCGCGGCCGCCGCTGCCATCGCCGCCTTCGCCATGATCGGCACTGCCGCCGCACAAT CGATGGTCGTCCGCTCGACC
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MNAPETPVRAAEAVTPDDADGRPPTVPLAKRVRRLVTQLGPSRMVATILFLVLAVLIARFSWQMPLINAAERALYDARAT LMAPKVQQDPRILLVTYNDETLFNTGIRSPLDRSLLTAALANIDQMGAKAIGIDIAFDSPRPDDAALKAQLRAMQTPTWL AYAEQASNPNTIFYEQQKFLESFIADVATARTRPTSVLFHTDDDSVIRRWPDRPAGLPPLMANALAPVDPAHAGYRGAIR FLVPARAGGGQVEPVFANIPIDSFALPMDAAMRAGFSELVKDRYVLIGGDIIDNDQFNTPLSRFPDAITGQHETMIGLEV HAHMLAQQLDGAWARPLAGPTLWVLALLVVLAGGLTSLIDMRARWVALAFLGQMAFFVAFPFWLQGRGIDTTTLPTFGWA VGWLFGYAAVGTAARTIGSRQRAFAQSALGKYLPADVAEQIMRDPDQLSLHGERRNIFCVFTDLEGFTKLSHAVTPETVA RLLNEYLDRLSDIVLAHGGTIDKFVGDAVVAFWGAPISRPDDGEKAATAALAMYQAGERFRVDLAAGDIPPIGMTRVGLH VGDAIVGNFGGEGRIQYTALGDSMNTASRLEAANKSLKTGVLISAEAAARSGRDDLVPMGRVTLRGRAQPVDVFTPRPDL APDQRGRIAALVAAHGAGDNDACVTLATELAQELRQDAAIQFLIERLNQTKRGESYVLS
Sequences:
>Translated_699_residues MNAPETPVRAAEAVTPDDADGRPPTVPLAKRVRRLVTQLGPSRMVATILFLVLAVLIARFSWQMPLINAAERALYDARAT LMAPKVQQDPRILLVTYNDETLFNTGIRSPLDRSLLTAALANIDQMGAKAIGIDIAFDSPRPDDAALKAQLRAMQTPTWL AYAEQASNPNTIFYEQQKFLESFIADVATARTRPTSVLFHTDDDSVIRRWPDRPAGLPPLMANALAPVDPAHAGYRGAIR FLVPARAGGGQVEPVFANIPIDSFALPMDAAMRAGFSELVKDRYVLIGGDIIDNDQFNTPLSRFPDAITGQHETMIGLEV HAHMLAQQLDGAWARPLAGPTLWVLALLVVLAGGLTSLIDMRARWVALAFLGQMAFFVAFPFWLQGRGIDTTTLPTFGWA VGWLFGYAAVGTAARTIGSRQRAFAQSALGKYLPADVAEQIMRDPDQLSLHGERRNIFCVFTDLEGFTKLSHAVTPETVA RLLNEYLDRLSDIVLAHGGTIDKFVGDAVVAFWGAPISRPDDGEKAATAALAMYQAGERFRVDLAAGDIPPIGMTRVGLH VGDAIVGNFGGEGRIQYTALGDSMNTASRLEAANKSLKTGVLISAEAAARSGRDDLVPMGRVTLRGRAQPVDVFTPRPDL APDQRGRIAALVAAHGAGDNDACVTLATELAQELRQDAAIQFLIERLNQTKRGESYVLS >Mature_699_residues MNAPETPVRAAEAVTPDDADGRPPTVPLAKRVRRLVTQLGPSRMVATILFLVLAVLIARFSWQMPLINAAERALYDARAT LMAPKVQQDPRILLVTYNDETLFNTGIRSPLDRSLLTAALANIDQMGAKAIGIDIAFDSPRPDDAALKAQLRAMQTPTWL AYAEQASNPNTIFYEQQKFLESFIADVATARTRPTSVLFHTDDDSVIRRWPDRPAGLPPLMANALAPVDPAHAGYRGAIR FLVPARAGGGQVEPVFANIPIDSFALPMDAAMRAGFSELVKDRYVLIGGDIIDNDQFNTPLSRFPDAITGQHETMIGLEV HAHMLAQQLDGAWARPLAGPTLWVLALLVVLAGGLTSLIDMRARWVALAFLGQMAFFVAFPFWLQGRGIDTTTLPTFGWA VGWLFGYAAVGTAARTIGSRQRAFAQSALGKYLPADVAEQIMRDPDQLSLHGERRNIFCVFTDLEGFTKLSHAVTPETVA RLLNEYLDRLSDIVLAHGGTIDKFVGDAVVAFWGAPISRPDDGEKAATAALAMYQAGERFRVDLAAGDIPPIGMTRVGLH VGDAIVGNFGGEGRIQYTALGDSMNTASRLEAANKSLKTGVLISAEAAARSGRDDLVPMGRVTLRGRAQPVDVFTPRPDL APDQRGRIAALVAAHGAGDNDACVTLATELAQELRQDAAIQFLIERLNQTKRGESYVLS
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17534659, Length=209, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI161078020, Length=214, Percent_Identity=28.9719626168224, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 75586; Mature: 75586
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPETPVRAAEAVTPDDADGRPPTVPLAKRVRRLVTQLGPSRMVATILFLVLAVLIARF CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SWQMPLINAAERALYDARATLMAPKVQQDPRILLVTYNDETLFNTGIRSPLDRSLLTAAL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHHH ANIDQMGAKAIGIDIAFDSPRPDDAALKAQLRAMQTPTWLAYAEQASNPNTIFYEQQKFL HHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHH ESFIADVATARTRPTSVLFHTDDDSVIRRWPDRPAGLPPLMANALAPVDPAHAGYRGAIR HHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEE FLVPARAGGGQVEPVFANIPIDSFALPMDAAMRAGFSELVKDRYVLIGGDIIDNDQFNTP EEEEECCCCCCCCEEEEECCCCHHCCCHHHHHHCCHHHHHHCCEEEEECEEECCCCCCCC LSRFPDAITGQHETMIGLEVHAHMLAQQLDGAWARPLAGPTLWVLALLVVLAGGLTSLID HHHCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH MRARWVALAFLGQMAFFVAFPFWLQGRGIDTTTLPTFGWAVGWLFGYAAVGTAARTIGSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRAFAQSALGKYLPADVAEQIMRDPDQLSLHGERRNIFCVFTDLEGFTKLSHAVTPETVA HHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEECCHHHHHHHHCCCHHHHH RLLNEYLDRLSDIVLAHGGTIDKFVGDAVVAFWGAPISRPDDGEKAATAALAMYQAGERF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEE RVDLAAGDIPPIGMTRVGLHVGDAIVGNFGGEGRIQYTALGDSMNTASRLEAANKSLKTG EEEEECCCCCCCCHHHHHHHHCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC VLISAEAAARSGRDDLVPMGRVTLRGRAQPVDVFTPRPDLAPDQRGRIAALVAAHGAGDN EEEEEHHHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCC DACVTLATELAQELRQDAAIQFLIERLNQTKRGESYVLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNAPETPVRAAEAVTPDDADGRPPTVPLAKRVRRLVTQLGPSRMVATILFLVLAVLIARF CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SWQMPLINAAERALYDARATLMAPKVQQDPRILLVTYNDETLFNTGIRSPLDRSLLTAAL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHHH ANIDQMGAKAIGIDIAFDSPRPDDAALKAQLRAMQTPTWLAYAEQASNPNTIFYEQQKFL HHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHH ESFIADVATARTRPTSVLFHTDDDSVIRRWPDRPAGLPPLMANALAPVDPAHAGYRGAIR HHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEE FLVPARAGGGQVEPVFANIPIDSFALPMDAAMRAGFSELVKDRYVLIGGDIIDNDQFNTP EEEEECCCCCCCCEEEEECCCCHHCCCHHHHHHCCHHHHHHCCEEEEECEEECCCCCCCC LSRFPDAITGQHETMIGLEVHAHMLAQQLDGAWARPLAGPTLWVLALLVVLAGGLTSLID HHHCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH MRARWVALAFLGQMAFFVAFPFWLQGRGIDTTTLPTFGWAVGWLFGYAAVGTAARTIGSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRAFAQSALGKYLPADVAEQIMRDPDQLSLHGERRNIFCVFTDLEGFTKLSHAVTPETVA HHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEECCHHHHHHHHCCCHHHHH RLLNEYLDRLSDIVLAHGGTIDKFVGDAVVAFWGAPISRPDDGEKAATAALAMYQAGERF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEE RVDLAAGDIPPIGMTRVGLHVGDAIVGNFGGEGRIQYTALGDSMNTASRLEAANKSLKTG EEEEECCCCCCCCHHHHHHHHCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC VLISAEAAARSGRDDLVPMGRVTLRGRAQPVDVFTPRPDLAPDQRGRIAALVAAHGAGDN EEEEEHHHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCC DACVTLATELAQELRQDAAIQFLIERLNQTKRGESYVLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]