Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485804

Identifier: 103485804

GI number: 103485804

Start: 313173

End: 314231

Strand: Reverse

Name: 103485804

Synonym: Sala_0309

Alternate gene names: NA

Gene position: 314231-313173 (Counterclockwise)

Preceding gene: 103485805

Following gene: 103485803

Centisome position: 9.39

GC content: 72.14

Gene sequence:

>1059_bases
ATGACGGGGCTTCGCGCACCCCTGCGGCTGGCTTTGCTGCTCATGCTGCTCTGCGCCGCCCCGACGGTGTGGGCCGGGCC
GTTCGTCGGACAACGCCTGATGACCGCCGACCACCCGCCGGCCGCCGCGCGCAACGCCGACGGCAGTACGCGGCTGCGCG
TCACCGTCTGGTATCCCGCAGCAGGCGATGACGGCGCCGGCACTGCGCCGCCCGTCGTGCGCGACGCCCCCCCTGCCGCC
GGGGGGCGCCGCGGCGTCATCCTCCTCTCGCACGGCTTCGGCGGCGCGGCGGTGGCGATGGGCTGGTTCGCCAGGACAAT
GGCCGAGGCGGGCTATGTCGTGATCGGCGTCGACCATCCGGGCAACAATGGGCTGGAGGCGATGACCAAAGCAGGCGCTG
CGCTCTTCTTCGAACGCCCCGGCGATCTGCGGCGGGCCTTTGACCATGTCGCCGCCGACCCCGTGCTTGGCCCGATGCTC
GACCCCGGCCGCGTCGCTGCCGCGGGTTTTTCGGCGGGCGGTTTCACTGCGCTCGCGCTGGGCGGCGCGCGCATGGAGAC
AGGACTGCTGCGCCGTTTCTGCACCGCCAACCCCGATGATGGCGTCTGCCGCCCGCAGCTCGAGTTTGCGGTCCCCATCG
ACGAGGTGCTGGCGATGCTGGACGGCGAAAGCGCCCGCGCCCGGCTGGCGGAGATCGCCGCCACGCCGCCGCGGCCGCGC
ATCCGCGCGCTGCTCGTCATGGCACCTGCGATCGTGCAGGCCTTCGATCCCGCCAGCCTCGCCGCGATTGATGTCGAAAC
GCGGCTGATCCTCGGCGGAGCGGACAGCGTGACGCCGAACGCGACCAACGGCCTCGCCGTCGCGGCATTGGTGCCCCGTG
CGCATCATCAGACCATCCCCGACGCCGGTCATTATGATTTCCTGACCGCCTGCGCCGCGGACGCGCCCAACCCCCTCCCC
TTTTGCGCGCACCAGCGCCAGACCGCCGCAGCGCATCGCGCCGCGATCACCGCCGCGCTCGACCTCTTCGCGCGGACGAT
CGGCGCGCGTACAGAATAA

Upstream 100 bases:

>100_bases
CGCCACCGCGCTCAACCTCATTTGACCGCGCGATGACCCGCCAGTTAGAGCGGCGTGCTGTATATCTGACTCACCGGGAT
TGCGTCAGAAAGGACAGACG

Downstream 100 bases:

>100_bases
GGATTTCCGCCCGGCGCCCTGCAACGTAAGACCCTCCTGTCAGGAGATCGTCCGTTGAGCATCGCAAGCATCGCCCTTCC
CCGCATCCTCCGCATCGGCG

Product: putative lipoprotein signal peptide

Products: NA

Alternate protein names: Alpha/Beta Hydrolase; Dienelactone Hydrolase; Lipoprotein

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTGLRAPLRLALLLMLLCAAPTVWAGPFVGQRLMTADHPPAAARNADGSTRLRVTVWYPAAGDDGAGTAPPVVRDAPPAA
GGRRGVILLSHGFGGAAVAMGWFARTMAEAGYVVIGVDHPGNNGLEAMTKAGAALFFERPGDLRRAFDHVAADPVLGPML
DPGRVAAAGFSAGGFTALALGGARMETGLLRRFCTANPDDGVCRPQLEFAVPIDEVLAMLDGESARARLAEIAATPPRPR
IRALLVMAPAIVQAFDPASLAAIDVETRLILGGADSVTPNATNGLAVAALVPRAHHQTIPDAGHYDFLTACAADAPNPLP
FCAHQRQTAAAHRAAITAALDLFARTIGARTE

Sequences:

>Translated_352_residues
MTGLRAPLRLALLLMLLCAAPTVWAGPFVGQRLMTADHPPAAARNADGSTRLRVTVWYPAAGDDGAGTAPPVVRDAPPAA
GGRRGVILLSHGFGGAAVAMGWFARTMAEAGYVVIGVDHPGNNGLEAMTKAGAALFFERPGDLRRAFDHVAADPVLGPML
DPGRVAAAGFSAGGFTALALGGARMETGLLRRFCTANPDDGVCRPQLEFAVPIDEVLAMLDGESARARLAEIAATPPRPR
IRALLVMAPAIVQAFDPASLAAIDVETRLILGGADSVTPNATNGLAVAALVPRAHHQTIPDAGHYDFLTACAADAPNPLP
FCAHQRQTAAAHRAAITAALDLFARTIGARTE
>Mature_351_residues
TGLRAPLRLALLLMLLCAAPTVWAGPFVGQRLMTADHPPAAARNADGSTRLRVTVWYPAAGDDGAGTAPPVVRDAPPAAG
GRRGVILLSHGFGGAAVAMGWFARTMAEAGYVVIGVDHPGNNGLEAMTKAGAALFFERPGDLRRAFDHVAADPVLGPMLD
PGRVAAAGFSAGGFTALALGGARMETGLLRRFCTANPDDGVCRPQLEFAVPIDEVLAMLDGESARARLAEIAATPPRPRI
RALLVMAPAIVQAFDPASLAAIDVETRLILGGADSVTPNATNGLAVAALVPRAHHQTIPDAGHYDFLTACAADAPNPLPF
CAHQRQTAAAHRAAITAALDLFARTIGARTE

Specific function: Unknown

COG id: COG4188

COG function: function code R; Predicted dienelactone hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36368; Mature: 36237

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLRAPLRLALLLMLLCAAPTVWAGPFVGQRLMTADHPPAAARNADGSTRLRVTVWYPA
CCCCCHHHHHHHHHHHHHCCCCHHCCHHHCCHHHCCCCCCCCCCCCCCCEEEEEEEEECC
AGDDGAGTAPPVVRDAPPAAGGRRGVILLSHGFGGAAVAMGWFARTMAEAGYVVIGVDHP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCC
GNNGLEAMTKAGAALFFERPGDLRRAFDHVAADPVLGPMLDPGRVAAAGFSAGGFTALAL
CCCCHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEE
GGARMETGLLRRFCTANPDDGVCRPQLEFAVPIDEVLAMLDGESARARLAEIAATPPRPR
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCHH
IRALLVMAPAIVQAFDPASLAAIDVETRLILGGADSVTPNATNGLAVAALVPRAHHQTIP
HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCCCC
DAGHYDFLTACAADAPNPLPFCAHQRQTAAAHRAAITAALDLFARTIGARTE
CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGLRAPLRLALLLMLLCAAPTVWAGPFVGQRLMTADHPPAAARNADGSTRLRVTVWYPA
CCCCHHHHHHHHHHHHHCCCCHHCCHHHCCHHHCCCCCCCCCCCCCCCEEEEEEEEECC
AGDDGAGTAPPVVRDAPPAAGGRRGVILLSHGFGGAAVAMGWFARTMAEAGYVVIGVDHP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCC
GNNGLEAMTKAGAALFFERPGDLRRAFDHVAADPVLGPMLDPGRVAAAGFSAGGFTALAL
CCCCHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEE
GGARMETGLLRRFCTANPDDGVCRPQLEFAVPIDEVLAMLDGESARARLAEIAATPPRPR
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCHH
IRALLVMAPAIVQAFDPASLAAIDVETRLILGGADSVTPNATNGLAVAALVPRAHHQTIP
HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCCCC
DAGHYDFLTACAADAPNPLPFCAHQRQTAAAHRAAITAALDLFARTIGARTE
CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA