| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485726
Identifier: 103485726
GI number: 103485726
Start: 238516
End: 238764
Strand: Reverse
Name: 103485726
Synonym: Sala_0230
Alternate gene names: NA
Gene position: 238764-238516 (Counterclockwise)
Preceding gene: 103485727
Following gene: 103485723
Centisome position: 7.14
GC content: 70.28
Gene sequence:
>249_bases TTGCCGCCCGGACTTGCCCCCGGCGCCTCTACCCTCCGGGCATGGGCCAGCGCGAGCTTCGTCGGCGCGCGCCATATCTT TCCGTGCGCCCTTGCCGCAGGCGAGGCTGAGCCGATGCGCCGCGCGCTACAGGAGCGGCTGGGCGCGCTCGAATGGCGGC TGCCCGGCCATATCGTCGCCGACGTCCTGGTCGAGTGCGGGCGCGATCCGCGAACGCTGCGGATCGAGATATTGACCGTG GAAGATTAG
Upstream 100 bases:
>100_bases ACGCCAGAACGGGAGTTGCGGCATGATGCGCTGGTCGCCCGCGCGCCCGCCGCGCCCCCGATGCCCGCACCGCCGCCAGC GTCATCTGCTGATCCGCGAG
Downstream 100 bases:
>100_bases AGCGGCATGCGCCAGACTGGGAACGCCTTGATTCCGCTCGTGGCGAGCGGGAAGCGCGATCACGTCGTCTAGCCCGTCGA TTGCCGCGTCATGCGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPPGLAPGASTLRAWASASFVGARHIFPCALAAGEAEPMRRALQERLGALEWRLPGHIVADVLVECGRDPRTLRIEILTV ED
Sequences:
>Translated_82_residues MPPGLAPGASTLRAWASASFVGARHIFPCALAAGEAEPMRRALQERLGALEWRLPGHIVADVLVECGRDPRTLRIEILTV ED >Mature_81_residues PPGLAPGASTLRAWASASFVGARHIFPCALAAGEAEPMRRALQERLGALEWRLPGHIVADVLVECGRDPRTLRIEILTVE D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8858; Mature: 8727
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGLAPGASTLRAWASASFVGARHIFPCALAAGEAEPMRRALQERLGALEWRLPGHIVA CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH DVLVECGRDPRTLRIEILTVED HHHHHCCCCCCEEEEEEEEECC >Mature Secondary Structure PPGLAPGASTLRAWASASFVGARHIFPCALAAGEAEPMRRALQERLGALEWRLPGHIVA CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH DVLVECGRDPRTLRIEILTVED HHHHHCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA