Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485692

Identifier: 103485692

GI number: 103485692

Start: 210709

End: 212157

Strand: Direct

Name: 103485692

Synonym: Sala_0196

Alternate gene names: NA

Gene position: 210709-212157 (Clockwise)

Preceding gene: 103485691

Following gene: 103485693

Centisome position: 6.3

GC content: 65.29

Gene sequence:

>1449_bases
ATGCTCTTCACCCCGACGCTCAGCGCCGACCGCGATCTCGCGACCGCGCCCGACTATGCCGCCTGGAGCAAGGCGGCGCG
CGAGCATGACAGGAAATCGGGGATGCAGGCGTGGCGCGATGCCGACGAGAGCAAGCATTTCGATTATAAGGCCATTCGGG
CAAGGCTCGAAAAGCTGCGCAAGCTGTCGGCGGCGGGCGACGTCAAGGGGCTGCTCTTCGTGCTCAACGAGGGCATCCAC
GGCAATATCGACGGCATGGGGCACGAGCGGCTGTATCAGAAGGCGCGTTTCGGGACGAAAAAGCTCGTCGAAGCCTATAT
CGCGGAGGTCGTCGCCTCGCTCGACAAGATCGCCGCCGCGCGCAGCATCGGTCGTGAGGAAAAGCGCGACTTCTTTCGCC
GCGCCCAGCATTGTTACGGCCGCTCGGCGCTATTGCTGTCGGGATCGGGCAGCTTCCTCTTCTTCCACATCGGCGTCGTC
AAGGCGCTCTGGTCCGAAGGCGTGCTGCCGTCGATCATGTCGGGCGCGAGTGGCGGGTCGATCGTCGCCGCGGTCGTCTG
CACGCGCAAGGACGCCGACATCGGCGCCTTTCTCGAAAGCGAGCGCCTCGCCAACCCCGATCGCGCGCCCGACGGACGGC
GCCTCGCCTCGGACGCGGTGCGCGAACGGCTCGCGGGCCTGATCCCCGACCTGACCTTTCAGGAGGCCTATGAGATCAGC
GGGCGTCACCTCAACGTCTCGGTCGCGCCCGCCGAAAAGCATCAGAACGGGCGGCTCCTGAACGCGATCACCGCGCCCAA
TGTGCTGATCCGCGAGGCCGTGCTCGCGTCATGTGCGGTCCCCGGCGTCTTTCCGCCCGTCATGCTGATGGCACGCGACG
ACGATGGCGCGCGCATCGCCTATCAGCCCGATCGTCGCTGGGTCGACGGGTCGGTGACGCACGACATCCCGACCAGGCGC
CTCGAACGCCTTTATGGCGTCAACCACCATATCGTCAGCCAGGCGAACCCGATCGCGCTGCCCTTCGCGACCGACACGCG
CAAGCAGATGGCGCCGATCGAGGCGATCCAGCATGCCTCGATGACCACCTTCAAGGCGTGGCTCAACGCGAACATGGTGA
TTTTCCAGAAACCGCTCGAGCTGATTCCGCCCTTGAACAGCCTCGCCAACATGGCGCGGTCGGTGATCAACCAGGAATAT
ACCGGCGACATCAACATCATCCGCCCGCCCAAATTCTGGTCGCCCGCGAAGATCCTCTCCGATCTGGGGCAGGATGATAT
CGACGAACTGGTCGACACCGGCATGCGCACCGCCTGGCCCAAGATCGAAATGGTCCGCACCCAGACCGCGATCAGCCGCG
CGCTCGAAGCGATCCTTGCGAAGATCGACAAGGCGGGCGACGACGGCCCCGGCCACCGCAGCGCCGCGCTCAAGAAAGCG
GTGCGGTGA

Upstream 100 bases:

>100_bases
GATGACGAGTGTATGGCAAGCATCGTCAAAACAGTTGCCAAAGACAACGTAAGCCCGCAAGAATCGAGAAAAACATACCA
TGCTCTCGCAGGATTACCGA

Downstream 100 bases:

>100_bases
GCGCCGACAACGAACCGCTGACGCTGCCGGCCTGGCAGGGCGGCGACGGGTCGAACCTCAATGTCACCCGCTGGTTGCCG
CAGGGCGATCCGAAGGCGGT

Product: patatin

Products: NA

Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Phospholipase Patatin Family; Patatin Family Protein; Esterase Of Alpha-Beta Hydrolase Superfamily Protein

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MLFTPTLSADRDLATAPDYAAWSKAAREHDRKSGMQAWRDADESKHFDYKAIRARLEKLRKLSAAGDVKGLLFVLNEGIH
GNIDGMGHERLYQKARFGTKKLVEAYIAEVVASLDKIAAARSIGREEKRDFFRRAQHCYGRSALLLSGSGSFLFFHIGVV
KALWSEGVLPSIMSGASGGSIVAAVVCTRKDADIGAFLESERLANPDRAPDGRRLASDAVRERLAGLIPDLTFQEAYEIS
GRHLNVSVAPAEKHQNGRLLNAITAPNVLIREAVLASCAVPGVFPPVMLMARDDDGARIAYQPDRRWVDGSVTHDIPTRR
LERLYGVNHHIVSQANPIALPFATDTRKQMAPIEAIQHASMTTFKAWLNANMVIFQKPLELIPPLNSLANMARSVINQEY
TGDINIIRPPKFWSPAKILSDLGQDDIDELVDTGMRTAWPKIEMVRTQTAISRALEAILAKIDKAGDDGPGHRSAALKKA
VR

Sequences:

>Translated_482_residues
MLFTPTLSADRDLATAPDYAAWSKAAREHDRKSGMQAWRDADESKHFDYKAIRARLEKLRKLSAAGDVKGLLFVLNEGIH
GNIDGMGHERLYQKARFGTKKLVEAYIAEVVASLDKIAAARSIGREEKRDFFRRAQHCYGRSALLLSGSGSFLFFHIGVV
KALWSEGVLPSIMSGASGGSIVAAVVCTRKDADIGAFLESERLANPDRAPDGRRLASDAVRERLAGLIPDLTFQEAYEIS
GRHLNVSVAPAEKHQNGRLLNAITAPNVLIREAVLASCAVPGVFPPVMLMARDDDGARIAYQPDRRWVDGSVTHDIPTRR
LERLYGVNHHIVSQANPIALPFATDTRKQMAPIEAIQHASMTTFKAWLNANMVIFQKPLELIPPLNSLANMARSVINQEY
TGDINIIRPPKFWSPAKILSDLGQDDIDELVDTGMRTAWPKIEMVRTQTAISRALEAILAKIDKAGDDGPGHRSAALKKA
VR
>Mature_482_residues
MLFTPTLSADRDLATAPDYAAWSKAAREHDRKSGMQAWRDADESKHFDYKAIRARLEKLRKLSAAGDVKGLLFVLNEGIH
GNIDGMGHERLYQKARFGTKKLVEAYIAEVVASLDKIAAARSIGREEKRDFFRRAQHCYGRSALLLSGSGSFLFFHIGVV
KALWSEGVLPSIMSGASGGSIVAAVVCTRKDADIGAFLESERLANPDRAPDGRRLASDAVRERLAGLIPDLTFQEAYEIS
GRHLNVSVAPAEKHQNGRLLNAITAPNVLIREAVLASCAVPGVFPPVMLMARDDDGARIAYQPDRRWVDGSVTHDIPTRR
LERLYGVNHHIVSQANPIALPFATDTRKQMAPIEAIQHASMTTFKAWLNANMVIFQKPLELIPPLNSLANMARSVINQEY
TGDINIIRPPKFWSPAKILSDLGQDDIDELVDTGMRTAWPKIEMVRTQTAISRALEAILAKIDKAGDDGPGHRSAALKKA
VR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324655, Length=479, Percent_Identity=27.348643006263, Blast_Score=203, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6322942, Length=479, Percent_Identity=28.6012526096033, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6323973, Length=385, Percent_Identity=24.4155844155844, Blast_Score=126, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53051; Mature: 53051

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTPTLSADRDLATAPDYAAWSKAAREHDRKSGMQAWRDADESKHFDYKAIRARLEKLR
CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KLSAAGDVKGLLFVLNEGIHGNIDGMGHERLYQKARFGTKKLVEAYIAEVVASLDKIAAA
HHHHCCCHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RSIGREEKRDFFRRAQHCYGRSALLLSGSGSFLFFHIGVVKALWSEGVLPSIMSGASGGS
HHCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCCC
IVAAVVCTRKDADIGAFLESERLANPDRAPDGRRLASDAVRERLAGLIPDLTFQEAYEIS
EEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC
GRHLNVSVAPAEKHQNGRLLNAITAPNVLIREAVLASCAVPGVFPPVMLMARDDDGARIA
CCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE
YQPDRRWVDGSVTHDIPTRRLERLYGVNHHIVSQANPIALPFATDTRKQMAPIEAIQHAS
ECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH
MTTFKAWLNANMVIFQKPLELIPPLNSLANMARSVINQEYTGDINIIRPPKFWSPAKILS
HHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHH
DLGQDDIDELVDTGMRTAWPKIEMVRTQTAISRALEAILAKIDKAGDDGPGHRSAALKKA
HCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VR
CC
>Mature Secondary Structure
MLFTPTLSADRDLATAPDYAAWSKAAREHDRKSGMQAWRDADESKHFDYKAIRARLEKLR
CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KLSAAGDVKGLLFVLNEGIHGNIDGMGHERLYQKARFGTKKLVEAYIAEVVASLDKIAAA
HHHHCCCHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RSIGREEKRDFFRRAQHCYGRSALLLSGSGSFLFFHIGVVKALWSEGVLPSIMSGASGGS
HHCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCCC
IVAAVVCTRKDADIGAFLESERLANPDRAPDGRRLASDAVRERLAGLIPDLTFQEAYEIS
EEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC
GRHLNVSVAPAEKHQNGRLLNAITAPNVLIREAVLASCAVPGVFPPVMLMARDDDGARIA
CCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE
YQPDRRWVDGSVTHDIPTRRLERLYGVNHHIVSQANPIALPFATDTRKQMAPIEAIQHAS
ECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH
MTTFKAWLNANMVIFQKPLELIPPLNSLANMARSVINQEYTGDINIIRPPKFWSPAKILS
HHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHH
DLGQDDIDELVDTGMRTAWPKIEMVRTQTAISRALEAILAKIDKAGDDGPGHRSAALKKA
HCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA