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The map label for this gene is etfB [H]

Identifier: 103485674

GI number: 103485674

Start: 181761

End: 182510

Strand: Direct

Name: etfB [H]

Synonym: Sala_0178

Alternate gene names: 103485674

Gene position: 181761-182510 (Clockwise)

Preceding gene: 103485673

Following gene: 103485675

Centisome position: 5.43

GC content: 63.87

Gene sequence:

>750_bases
ATGAAAATCCTCGTCCCCGTCAAGCGGGTGCTCGATTACAACGTCAAGCCGCGGGTCAAGGCCGACGGCACGGGCGTTGA
CCTTGCGAACGTCAAAATGTCGATGAACCCGTTCGACGAGATCGCGGTCGAAGAGGCGATCCGCCTGAAGGAAAAGGGCG
TCGCGACCGAGATTGTTGCCGTCAGCATCGGCCCGGCGAAGGCGCAGGAAACGCTGCGCACCGCGCTCGCGATGGGCGCC
GACCGCGCGATTCTCGTCCAGACCGACGATGCCGTCGAGCCGCTTGCGGTGGCGAAGATCCTCAAAAGCATCGCCGACGC
CGAACAGCCCGGCCTTGTCATTCTCGGCAAGCAGGCGATCGACGACGACAACAACCAGACCGGGCAGATGCTCGCCGCGC
TCACCGGCTGGGCGCAGGGCACCTTTGCCAGCGCGGTCAATGTCGAGGGCGACCATGTCAGCGTCACCCGCGAAGTCGAT
GGCGGCCTCGAGACGGTGAAGCTGAAGCTCCCCGCGATTGTCACCACCGACCTTCGCCTCAACGAGCCGCGCTATGCGTC
GCTGCCGAACATCATGAAGGCCAAGTCGAAGCCGCTCGATGTGAAGGCGCCCACCGATTATGGCGTCGACACGACGCCGC
GCGTCAAGACGCTCAAGGTCTCCGAACCGCCGGTTCGCCAGGCCGGTATCAAGGTCGCCGATGTCGATGAACTGGTTGCC
AAGCTCAAGGCGATGGGCGTCCACAGCTAA

Upstream 100 bases:

>100_bases
TCTCCCCCAAGGGGAGAGGAATGAGGGACTGCTGGTTGACGTTTACGTAAGCGCAAATTATGGCGCGGTGCACAATTTGC
TTAAGAGGAGCTTTGAGCCC

Downstream 100 bases:

>100_bases
TCTACCCCCGTTAGTGTCGAGCGAAGTCGAGACACCCATCGGGACAGCGCAAGGTCGAGGGGCATCTCGACTTCGCTCGA
TGCGAACGGCAAGGGATAAA

Product: electron transfer flavoprotein beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPVKRVLDYNVKPRVKADGTGVDLANVKMSMNPFDEIAVEEAIRLKEKGVATEIVAVSIGPAKAQETLRTALAMGA
DRAILVQTDDAVEPLAVAKILKSIADAEQPGLVILGKQAIDDDNNQTGQMLAALTGWAQGTFASAVNVEGDHVSVTREVD
GGLETVKLKLPAIVTTDLRLNEPRYASLPNIMKAKSKPLDVKAPTDYGVDTTPRVKTLKVSEPPVRQAGIKVADVDELVA
KLKAMGVHS

Sequences:

>Translated_249_residues
MKILVPVKRVLDYNVKPRVKADGTGVDLANVKMSMNPFDEIAVEEAIRLKEKGVATEIVAVSIGPAKAQETLRTALAMGA
DRAILVQTDDAVEPLAVAKILKSIADAEQPGLVILGKQAIDDDNNQTGQMLAALTGWAQGTFASAVNVEGDHVSVTREVD
GGLETVKLKLPAIVTTDLRLNEPRYASLPNIMKAKSKPLDVKAPTDYGVDTTPRVKTLKVSEPPVRQAGIKVADVDELVA
KLKAMGVHS
>Mature_249_residues
MKILVPVKRVLDYNVKPRVKADGTGVDLANVKMSMNPFDEIAVEEAIRLKEKGVATEIVAVSIGPAKAQETLRTALAMGA
DRAILVQTDDAVEPLAVAKILKSIADAEQPGLVILGKQAIDDDNNQTGQMLAALTGWAQGTFASAVNVEGDHVSVTREVD
GGLETVKLKLPAIVTTDLRLNEPRYASLPNIMKAKSKPLDVKAPTDYGVDTTPRVKTLKVSEPPVRQAGIKVADVDELVA
KLKAMGVHS

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=250, Percent_Identity=60.8, Blast_Score=297, Evalue=7e-81,
Organism=Homo sapiens, GI62420877, Length=233, Percent_Identity=60.9442060085837, Blast_Score=276, Evalue=2e-74,
Organism=Escherichia coli, GI87081682, Length=235, Percent_Identity=25.531914893617, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=252, Percent_Identity=58.3333333333333, Blast_Score=268, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=48.8, Blast_Score=233, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24651147, Length=249, Percent_Identity=59.8393574297189, Blast_Score=276, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24651145, Length=249, Percent_Identity=59.8393574297189, Blast_Score=276, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26519; Mature: 26519

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVLDYNVKPRVKADGTGVDLANVKMSMNPFDEIAVEEAIRLKEKGVATEIVA
CEEEEEHHHHHCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
VSIGPAKAQETLRTALAMGADRAILVQTDDAVEPLAVAKILKSIADAEQPGLVILGKQAI
EECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDNNQTGQMLAALTGWAQGTFASAVNVEGDHVSVTREVDGGLETVKLKLPAIVTTDLRL
CCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKSKPLDVKAPTDYGVDTTPRVKTLKVSEPPVRQAGIKVADVDELVA
CCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHCCEEECHHHHHH
KLKAMGVHS
HHHHHCCCC
>Mature Secondary Structure
MKILVPVKRVLDYNVKPRVKADGTGVDLANVKMSMNPFDEIAVEEAIRLKEKGVATEIVA
CEEEEEHHHHHCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
VSIGPAKAQETLRTALAMGADRAILVQTDDAVEPLAVAKILKSIADAEQPGLVILGKQAI
EECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDNNQTGQMLAALTGWAQGTFASAVNVEGDHVSVTREVDGGLETVKLKLPAIVTTDLRL
CCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKSKPLDVKAPTDYGVDTTPRVKTLKVSEPPVRQAGIKVADVDELVA
CCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHCCEEECHHHHHH
KLKAMGVHS
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]