BacMap

Definition	Sphingopyxis alaskensis RB2256, complete genome.
Accession	NC_008048
Length	3,345,170

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The map label for this gene is lcfA [H]

Identifier: 103485665

GI number: 103485665

Start: 171643

End: 173307

Strand: Reverse

Name: lcfA [H]

Synonym: Sala_0169

Alternate gene names: 103485665

Gene position: 173307-171643 (Counterclockwise)

Preceding gene: 103485683

Following gene: 103485661

Centisome position: 5.18

GC content: 66.49

Gene sequence:

>1665_bases
ATGGACAGCCGTTTTTCCTGGTCGACCGAATATCATCACCCCACCGACTGGGACCAGAGCTTCGCGCCGCTGTCGCTGCC
GGACATGTTCGCGGCGAGTGTGGCGCGAAAGGGTGAGGCGCCGATGCTCGATTTCATGGGGCGCCAGTTCAGCTACGTCG
AGGTCGCGCTTGGCGTGCAGCGCGTCGCGCGGGGGCTGCAACTGCTGGGGCTGGGCAAGGGCAGTCGCATTGGCCTCTTC
CTCCCCAACGTTCCCCATTATGTCGCGGCCTATTATGGCGCGCTCGCCGCGGGCGCCACGGTGGTCAATTTCTCCCCGCT
CTATACCGTCGCCGAGCTGGAGGCACAGGTCGAGGATTCGGGCACCGATACGCTGTTCACGCTGAGCGCCGCGGCGCTGC
TGCCCACCGCGTTCAAGGTGCTCGACGGATCGAGTCTCAACCGGCTGATCGTCGGATCGGTCGCGGGCGGCCTGTCGAAG
ACGAAGTCGCTGCTTTATCGCCTGTTCAAGCGCCGCGAGGTCGCGCCGCTGCCGGGCGATCCGCGCGTCATCCGCTTCTC
GGAGCTCACCGACAATGACGGGCGGCCCGAGCCCGTCGCAATCGCCCCCGAAACCGACGTCGCGCTGATCCAGTACACCG
GCGGCACGACGGGAACGCCAAAGGGCGCCAAGCTGACGCACCAGAATCTCACCGCCAATGCACGGCAGGTGAATGCGATC
GACCCCGATACGCAAGCCGAGGACCGCATCCTCGGTGTCCTCCCCTTCTTCCACGTTTTTGCGAACACCTGCGTGCTCAA
TCGCACGGTGCTCAACGGCGGGTCGATCACGATGCTGCCGCGCTTCGACGCGAAGCAGGCACTGGCGGCGATCGGCCGCA
CGAAGACGACCGCGCTGCCCGGCGTTCCAACCATGTATCAGGCGCTGCTTGACCATCCCGATCTGGCGCGCACCGATTTT
TCCTCGCTGCGCGTGTGCATTTCGGGCGGCGCGCCGATGCCCGCCGAGCTGCGCGAGAAATTCGTCGCAGCGACCGGGGC
CTCGCTGGTCGAAGGCTATGGCCTCACCGAAAGTTCGGGGGTCGTCGCGACGAACCCCTATGACGGCCCGGTCCGTCCGG
GCACGATCGGCCAGCCTATCCCGGCGACGCACATCCGCCTGCTCGACAAGGAAGACCCGTCGAAAGACGCTCCCGACGGC
GAGCCCGGCGAGCTGGCGGTGAAAGGTCCGCAGGTCATGCAGGGCTACTGGAACCGCCCGGAGGCCGATGCGGAGAGCTT
CACCGCTGACGGCTGGCTGCGCACTGGCGATGTCGCGGTGATCGAGGAGGGCGGCTATATCCGCATCGTCGACCGGCTGA
AGGACATGATCGCCGTCGGCGGCTTCAAAGTCTATCCGAGCGTGATCGAGGCGCATCTCCACGAGCATCCCGCGGTCAAG
GAAGCGATCGTGCTGGGCGTTCCCGACGCCTATCGCGGCGAAGCGCCCAAGGCTTTTGTGACGCTGGAAGAGGGCTTCGA
GGTTACCGGCGAGGCGCTCGCCGCCTGGCTCAACCCCCAGCTCGGCAAGCATGAGCGCGTGATCGCGGTCGAGGTGCGCG
AGGCGCTGCCCAAGACGATGATCGGCAAGCTCGACCGCAAGGCGCTCAGGGCCGAGGCGGGATAG

Upstream 100 bases:

>100_bases
ACTAGCCGCCCCGGCGGCGCACGGCAAGCAAGCCCGGTTGCCAATCGCGCCTTGCAGACCTTAGTGTAAAGAAACCACTG
CGAGAGGATCGCCAACCCCG

Downstream 100 bases:

>100_bases
CGACAGCGCGGAACGCCGCCGGGTTCAGAAAACACCGGGCTCCCGCGAAGGCGGGGATACACGATTTTTCGTCGATCCTA
CCGGAAACGCGCGCGCTATT

Product: AMP-dependent synthetase and ligase

Products: NA

Alternate protein names: Long-chain acyl-CoA synthetase [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MDSRFSWSTEYHHPTDWDQSFAPLSLPDMFAASVARKGEAPMLDFMGRQFSYVEVALGVQRVARGLQLLGLGKGSRIGLF
LPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDSGTDTLFTLSAAALLPTAFKVLDGSSLNRLIVGSVAGGLSK
TKSLLYRLFKRREVAPLPGDPRVIRFSELTDNDGRPEPVAIAPETDVALIQYTGGTTGTPKGAKLTHQNLTANARQVNAI
DPDTQAEDRILGVLPFFHVFANTCVLNRTVLNGGSITMLPRFDAKQALAAIGRTKTTALPGVPTMYQALLDHPDLARTDF
SSLRVCISGGAPMPAELREKFVAATGASLVEGYGLTESSGVVATNPYDGPVRPGTIGQPIPATHIRLLDKEDPSKDAPDG
EPGELAVKGPQVMQGYWNRPEADAESFTADGWLRTGDVAVIEEGGYIRIVDRLKDMIAVGGFKVYPSVIEAHLHEHPAVK
EAIVLGVPDAYRGEAPKAFVTLEEGFEVTGEALAAWLNPQLGKHERVIAVEVREALPKTMIGKLDRKALRAEAG

Sequences:

>Translated_554_residues
MDSRFSWSTEYHHPTDWDQSFAPLSLPDMFAASVARKGEAPMLDFMGRQFSYVEVALGVQRVARGLQLLGLGKGSRIGLF
LPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDSGTDTLFTLSAAALLPTAFKVLDGSSLNRLIVGSVAGGLSK
TKSLLYRLFKRREVAPLPGDPRVIRFSELTDNDGRPEPVAIAPETDVALIQYTGGTTGTPKGAKLTHQNLTANARQVNAI
DPDTQAEDRILGVLPFFHVFANTCVLNRTVLNGGSITMLPRFDAKQALAAIGRTKTTALPGVPTMYQALLDHPDLARTDF
SSLRVCISGGAPMPAELREKFVAATGASLVEGYGLTESSGVVATNPYDGPVRPGTIGQPIPATHIRLLDKEDPSKDAPDG
EPGELAVKGPQVMQGYWNRPEADAESFTADGWLRTGDVAVIEEGGYIRIVDRLKDMIAVGGFKVYPSVIEAHLHEHPAVK
EAIVLGVPDAYRGEAPKAFVTLEEGFEVTGEALAAWLNPQLGKHERVIAVEVREALPKTMIGKLDRKALRAEAG
>Mature_554_residues
MDSRFSWSTEYHHPTDWDQSFAPLSLPDMFAASVARKGEAPMLDFMGRQFSYVEVALGVQRVARGLQLLGLGKGSRIGLF
LPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDSGTDTLFTLSAAALLPTAFKVLDGSSLNRLIVGSVAGGLSK
TKSLLYRLFKRREVAPLPGDPRVIRFSELTDNDGRPEPVAIAPETDVALIQYTGGTTGTPKGAKLTHQNLTANARQVNAI
DPDTQAEDRILGVLPFFHVFANTCVLNRTVLNGGSITMLPRFDAKQALAAIGRTKTTALPGVPTMYQALLDHPDLARTDF
SSLRVCISGGAPMPAELREKFVAATGASLVEGYGLTESSGVVATNPYDGPVRPGTIGQPIPATHIRLLDKEDPSKDAPDG
EPGELAVKGPQVMQGYWNRPEADAESFTADGWLRTGDVAVIEEGGYIRIVDRLKDMIAVGGFKVYPSVIEAHLHEHPAVK
EAIVLGVPDAYRGEAPKAFVTLEEGFEVTGEALAAWLNPQLGKHERVIAVEVREALPKTMIGKLDRKALRAEAG

Specific function: Esterification, Concomitant With Transport, Of Exogenous Long-Chain Fatty Acids Into Metabolically Active CoA Thioesters For Subsequent Degradation Or Incorporation Into Phospholipids. [C]

COG id: COG0318

COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Gene ontology:

Cell location: Partially Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]

Homologues:

Organism=Homo sapiens, GI156151445, Length=518, Percent_Identity=30.6949806949807, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI187761345, Length=376, Percent_Identity=33.5106382978723, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI187761343, Length=376, Percent_Identity=33.5106382978723, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI38505220, Length=529, Percent_Identity=27.2211720226843, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI58082049, Length=517, Percent_Identity=26.1121856866538, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI42544132, Length=544, Percent_Identity=24.6323529411765, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI157311624, Length=517, Percent_Identity=25.9187620889749, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI157311622, Length=517, Percent_Identity=25.9187620889749, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI115511026, Length=525, Percent_Identity=25.9047619047619, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI122937307, Length=496, Percent_Identity=27.4193548387097, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI40807491, Length=517, Percent_Identity=26.6924564796905, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI42794756, Length=525, Percent_Identity=24.5714285714286, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI42794760, Length=525, Percent_Identity=24.5714285714286, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI42794758, Length=525, Percent_Identity=24.5714285714286, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI57165412, Length=355, Percent_Identity=29.0140845070423, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI28416953, Length=525, Percent_Identity=24.7619047619048, Blast_Score=114, Evalue=4e-25,
Organism=Homo sapiens, GI57165410, Length=373, Percent_Identity=28.686327077748, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI27477105, Length=528, Percent_Identity=22.7272727272727, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI8923896, Length=540, Percent_Identity=23.1481481481481, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI195947378, Length=400, Percent_Identity=26.5, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI253970489, Length=550, Percent_Identity=23.2727272727273, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI42794754, Length=332, Percent_Identity=25.9036144578313, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI42794752, Length=332, Percent_Identity=25.9036144578313, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI42544134, Length=370, Percent_Identity=22.4324324324324, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI13375727, Length=539, Percent_Identity=23.0055658627087, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI12669909, Length=230, Percent_Identity=26.9565217391304, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI4758332, Length=230, Percent_Identity=26.9565217391304, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI13236579, Length=309, Percent_Identity=24.5954692556634, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1788107, Length=562, Percent_Identity=39.6797153024911, Blast_Score=356, Evalue=2e-99,
Organism=Escherichia coli, GI221142682, Length=511, Percent_Identity=27.0058708414873, Blast_Score=186, Evalue=5e-48,
Organism=Escherichia coli, GI145693145, Length=514, Percent_Identity=26.0700389105058, Blast_Score=147, Evalue=3e-36,
Organism=Escherichia coli, GI1786810, Length=358, Percent_Identity=31.2849162011173, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1789201, Length=445, Percent_Identity=27.8651685393258, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1790505, Length=536, Percent_Identity=24.8134328358209, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788595, Length=322, Percent_Identity=25.4658385093168, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1786801, Length=554, Percent_Identity=25.4512635379061, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1786529, Length=536, Percent_Identity=23.5074626865672, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71994703, Length=529, Percent_Identity=32.703213610586, Blast_Score=230, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI71994694, Length=529, Percent_Identity=32.703213610586, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI71994690, Length=529, Percent_Identity=32.703213610586, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17559526, Length=506, Percent_Identity=30.2371541501976, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17557194, Length=520, Percent_Identity=29.0384615384615, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17558820, Length=517, Percent_Identity=29.5938104448743, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI32563687, Length=378, Percent_Identity=32.5396825396825, Blast_Score=188, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI17538037, Length=517, Percent_Identity=29.4003868471954, Blast_Score=184, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17560308, Length=520, Percent_Identity=30, Blast_Score=182, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17531443, Length=499, Percent_Identity=29.8597194388778, Blast_Score=181, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI17560140, Length=518, Percent_Identity=27.027027027027, Blast_Score=163, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71996755, Length=536, Percent_Identity=24.4402985074627, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71985884, Length=369, Percent_Identity=24.6612466124661, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17556552, Length=334, Percent_Identity=30.2395209580838, Blast_Score=111, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17510401, Length=335, Percent_Identity=29.8507462686567, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17541856, Length=472, Percent_Identity=26.0593220338983, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI25141359, Length=494, Percent_Identity=24.0890688259109, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17564090, Length=351, Percent_Identity=27.3504273504274, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25147511, Length=507, Percent_Identity=25.2465483234714, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71982997, Length=533, Percent_Identity=27.0168855534709, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71983001, Length=533, Percent_Identity=27.0168855534709, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17553312, Length=372, Percent_Identity=28.2258064516129, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI25141361, Length=266, Percent_Identity=25.187969924812, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193204819, Length=173, Percent_Identity=31.2138728323699, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319699, Length=357, Percent_Identity=32.2128851540616, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6323903, Length=574, Percent_Identity=22.8222996515679, Blast_Score=103, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6323182, Length=537, Percent_Identity=24.7672253258845, Blast_Score=101, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6322182, Length=466, Percent_Identity=23.175965665236, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6320852, Length=344, Percent_Identity=26.1627906976744, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6319264, Length=533, Percent_Identity=23.6397748592871, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324893, Length=460, Percent_Identity=21.5217391304348, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI18859661, Length=514, Percent_Identity=33.0739299610895, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24581924, Length=519, Percent_Identity=31.5992292870906, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI21355181, Length=513, Percent_Identity=29.6296296296296, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI19922652, Length=528, Percent_Identity=25.7575757575758, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24648260, Length=502, Percent_Identity=25.6972111553785, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24666501, Length=497, Percent_Identity=24.9496981891348, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24666497, Length=497, Percent_Identity=24.9496981891348, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI281366413, Length=497, Percent_Identity=24.9496981891348, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI21358303, Length=480, Percent_Identity=23.125, Blast_Score=112, Evalue=8e-25,
Organism=Drosophila melanogaster, GI281365686, Length=482, Percent_Identity=23.0290456431535, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21356441, Length=505, Percent_Identity=22.3762376237624, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21356947, Length=363, Percent_Identity=26.7217630853994, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI62471681, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI62471687, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24586634, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI22026970, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI62471679, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI62471683, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI62471685, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24586636, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI62471689, Length=500, Percent_Identity=25, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI62472339, Length=555, Percent_Identity=25.7657657657658, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24667955, Length=554, Percent_Identity=25.6317689530686, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI17933690, Length=534, Percent_Identity=22.0973782771536, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24648253, Length=507, Percent_Identity=22.4852071005917, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24648255, Length=508, Percent_Identity=22.8346456692913, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24648257, Length=492, Percent_Identity=24.7967479674797, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI19921316, Length=558, Percent_Identity=23.6559139784946, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24653035, Length=361, Percent_Identity=24.0997229916898, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24667959, Length=472, Percent_Identity=25.8474576271186, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI20130357, Length=320, Percent_Identity=26.5625, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI161076582, Length=370, Percent_Identity=23.5135135135135, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI221329755, Length=584, Percent_Identity=20.8904109589041, Blast_Score=82, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24648676, Length=378, Percent_Identity=26.7195767195767, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24656500, Length=360, Percent_Identity=23.8888888888889, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355225, Length=548, Percent_Identity=24.0875912408759, Blast_Score=79, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020845
- InterPro:   IPR000873 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: =6.2.1.3 [H]

Molecular weight: Translated: 59447; Mature: 59447

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRFSWSTEYHHPTDWDQSFAPLSLPDMFAASVARKGEAPMLDFMGRQFSYVEVALGVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
RVARGLQLLGLGKGSRIGLFLPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDS
HHHCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCC
GTDTLFTLSAAALLPTAFKVLDGSSLNRLIVGSVAGGLSKTKSLLYRLFKRREVAPLPGD
CCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCC
PRVIRFSELTDNDGRPEPVAIAPETDVALIQYTGGTTGTPKGAKLTHQNLTANARQVNAI
CCEEEEEECCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEECCC
DPDTQAEDRILGVLPFFHVFANTCVLNRTVLNGGSITMLPRFDAKQALAAIGRTKTTALP
CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCC
GVPTMYQALLDHPDLARTDFSSLRVCISGGAPMPAELREKFVAATGASLVEGYGLTESSG
CCHHHHHHHHCCCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCC
VVATNPYDGPVRPGTIGQPIPATHIRLLDKEDPSKDAPDGEPGELAVKGPQVMQGYWNRP
EEEECCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCEEECCHHHHHHCCCCC
EADAESFTADGWLRTGDVAVIEEGGYIRIVDRLKDMIAVGGFKVYPSVIEAHLHEHPAVK
CCCHHHCCCCCCEEECCEEEEECCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
EAIVLGVPDAYRGEAPKAFVTLEEGFEVTGEALAAWLNPQLGKHERVIAVEVREALPKTM
HEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHH
IGKLDRKALRAEAG
HHHHHHHHHHCCCC
>Mature Secondary Structure
MDSRFSWSTEYHHPTDWDQSFAPLSLPDMFAASVARKGEAPMLDFMGRQFSYVEVALGVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
RVARGLQLLGLGKGSRIGLFLPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDS
HHHCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCC
GTDTLFTLSAAALLPTAFKVLDGSSLNRLIVGSVAGGLSKTKSLLYRLFKRREVAPLPGD
CCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCC
PRVIRFSELTDNDGRPEPVAIAPETDVALIQYTGGTTGTPKGAKLTHQNLTANARQVNAI
CCEEEEEECCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEECCC
DPDTQAEDRILGVLPFFHVFANTCVLNRTVLNGGSITMLPRFDAKQALAAIGRTKTTALP
CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCC
GVPTMYQALLDHPDLARTDFSSLRVCISGGAPMPAELREKFVAATGASLVEGYGLTESSG
CCHHHHHHHHCCCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCC
VVATNPYDGPVRPGTIGQPIPATHIRLLDKEDPSKDAPDGEPGELAVKGPQVMQGYWNRP
EEEECCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCEEECCHHHHHHCCCCC
EADAESFTADGWLRTGDVAVIEEGGYIRIVDRLKDMIAVGGFKVYPSVIEAHLHEHPAVK
CCCHHHCCCCCCEEECCEEEEECCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
EAIVLGVPDAYRGEAPKAFVTLEEGFEVTGEALAAWLNPQLGKHERVIAVEVREALPKTM
HEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHH
IGKLDRKALRAEAG
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]