Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is argJ [H]

Identifier: 103485651

GI number: 103485651

Start: 150674

End: 151900

Strand: Direct

Name: argJ [H]

Synonym: Sala_0155

Alternate gene names: 103485651

Gene position: 150674-151900 (Clockwise)

Preceding gene: 103485650

Following gene: 103485660

Centisome position: 4.5

GC content: 68.95

Gene sequence:

>1227_bases
ATGACCATCCGCTCGCCCCTCGCCCCCGCTGCCTTCCCCGACCTTCCCGAAATCGCCGGGGTGACGCGCCGCGTCGCGCG
TGCGCGGTACAAGGACTGGGACCGCTGCGACCTCACCTATATCGAGCTGACCCCCGGCACGACGGTTGCGGGGGTGTTCA
CGCGCAACATCTGCTGCTCGTCCGAAGTCGAACTGGGGCGCGAACAGGTGAGGCGCGGCACCGCGCGCGCGCTGATCGTC
AATGCGGGCAACAGCAACGCCTTCACCGGCTATCGCGGGCGTACGGCGGTCGAGGCGATCATGGCGCAGGTCGCCGACCA
TCTCGGCTGTGCGGCGGGCGACGTCTTCGTCAGCTCGACCGGGGTGATCGGCGTGCCTTTGCCGAAAGACAAGGCGCGCG
CGGGTGTGGCGGCGGCGCTGACCGCCAAACCCTGTTCGTGGGAAGTCGCCGCCGAAACGATCGGCACCACCGACACCTTT
GCCAAGGGTGCGGCAGCGAGCGCGATCGTCGGCGGCCGCACCGTCCATGTCGCGGGAATCGCCAAGGGATCGGGAATGAT
CGCGCCCGACATGGCGACGATGCTCGGCTATATCTTCACCGACGCCGCGGTGGCGCCCGCGCTGTTGCAGGAGATGTTGC
GCGAGGCGGCCGGCGGGACGTTCAATGCCATTACCGTCGACAGCGACACCTCGACCAGCGACACGGTGCTGCTGTTCGCA
ACGGGGCAGGCGGGCCACGCGCCGCTCGCCGCCCGCGACGATCCCGGCGCCGACGCCCTCTACGCCGCGATCCGGCAGGT
CGCGCTCGATCTCGCGCATCAGGTGGTGCGCGACGGCGAAGGCGCGTCCAAGTTCATCGAGGTGCAGGTGACGCGAGCCG
TCAGCGACGACAGCGCGAAGCGCGTCGCGCTCGCCATCGCCAATTCGCCGCTCGTGAAAACCGCGATCGCGGGCGAGGAC
GCCAACTGGGGCCGCGTCGTGATGGCGGTCGGCAAGGCCGGCGAACCCGCCGACCGCGACCGATTAGCGATCCGCTTCGG
CGACCATTGGGTCGCAAAAGACGGGCTGGCCGTCGATGGTTATGACGAGGCGCCGGTCGCGGCGCACCTCAAAGGCCGGG
ATATCCGCATCGGCGCCGACCTGGGACTGGGCGAAGGCCGCGCGACCGTTTGGACGTGCGACCTGACGCACGGATATATC
AGCATCAACGCGGATTATCGCAGCTAG

Upstream 100 bases:

>100_bases
GGGCCATCGGCCTTGCGCATGGCGACAAGCCCCCACCCCAACCCCTCCCCTGAAGGGGAGGGGCTTTTGATTCCCGCTAG
CAACCGTTAAGCGCACCACC

Downstream 100 bases:

>100_bases
AGCGGCGTGCTGTATATCTGATGCAATCACCGGCTATCAGGCCAGCACAAGGCTGCACATTGTGGATTGCCGCGTCGCTT
CGCTCCTCGCAATGACGGGG

Product: bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein

Products: NA

Alternate protein names: Glutamate N-acetyltransferase; Ornithine acetyltransferase; OATase; Ornithine transacetylase; Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MTIRSPLAPAAFPDLPEIAGVTRRVARARYKDWDRCDLTYIELTPGTTVAGVFTRNICCSSEVELGREQVRRGTARALIV
NAGNSNAFTGYRGRTAVEAIMAQVADHLGCAAGDVFVSSTGVIGVPLPKDKARAGVAAALTAKPCSWEVAAETIGTTDTF
AKGAAASAIVGGRTVHVAGIAKGSGMIAPDMATMLGYIFTDAAVAPALLQEMLREAAGGTFNAITVDSDTSTSDTVLLFA
TGQAGHAPLAARDDPGADALYAAIRQVALDLAHQVVRDGEGASKFIEVQVTRAVSDDSAKRVALAIANSPLVKTAIAGED
ANWGRVVMAVGKAGEPADRDRLAIRFGDHWVAKDGLAVDGYDEAPVAAHLKGRDIRIGADLGLGEGRATVWTCDLTHGYI
SINADYRS

Sequences:

>Translated_408_residues
MTIRSPLAPAAFPDLPEIAGVTRRVARARYKDWDRCDLTYIELTPGTTVAGVFTRNICCSSEVELGREQVRRGTARALIV
NAGNSNAFTGYRGRTAVEAIMAQVADHLGCAAGDVFVSSTGVIGVPLPKDKARAGVAAALTAKPCSWEVAAETIGTTDTF
AKGAAASAIVGGRTVHVAGIAKGSGMIAPDMATMLGYIFTDAAVAPALLQEMLREAAGGTFNAITVDSDTSTSDTVLLFA
TGQAGHAPLAARDDPGADALYAAIRQVALDLAHQVVRDGEGASKFIEVQVTRAVSDDSAKRVALAIANSPLVKTAIAGED
ANWGRVVMAVGKAGEPADRDRLAIRFGDHWVAKDGLAVDGYDEAPVAAHLKGRDIRIGADLGLGEGRATVWTCDLTHGYI
SINADYRS
>Mature_407_residues
TIRSPLAPAAFPDLPEIAGVTRRVARARYKDWDRCDLTYIELTPGTTVAGVFTRNICCSSEVELGREQVRRGTARALIVN
AGNSNAFTGYRGRTAVEAIMAQVADHLGCAAGDVFVSSTGVIGVPLPKDKARAGVAAALTAKPCSWEVAAETIGTTDTFA
KGAAASAIVGGRTVHVAGIAKGSGMIAPDMATMLGYIFTDAAVAPALLQEMLREAAGGTFNAITVDSDTSTSDTVLLFAT
GQAGHAPLAARDDPGADALYAAIRQVALDLAHQVVRDGEGASKFIEVQVTRAVSDDSAKRVALAIANSPLVKTAIAGEDA
NWGRVVMAVGKAGEPADRDRLAIRFGDHWVAKDGLAVDGYDEAPVAAHLKGRDIRIGADLGLGEGRATVWTCDLTHGYIS
INADYRS

Specific function: Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis:the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate [H]

COG id: COG1364

COG function: function code E; N-acetylglutamate synthase (N-acetylornithine aminotransferase)

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArgJ family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323707, Length=383, Percent_Identity=35.7702349869452, Blast_Score=217, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002813
- InterPro:   IPR016117 [H]

Pfam domain/function: PF01960 ArgJ [H]

EC number: =2.3.1.35; =2.3.1.1 [H]

Molecular weight: Translated: 42433; Mature: 42302

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRSPLAPAAFPDLPEIAGVTRRVARARYKDWDRCDLTYIELTPGTTVAGVFTRNICCS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHCCCCC
SEVELGREQVRRGTARALIVNAGNSNAFTGYRGRTAVEAIMAQVADHLGCAAGDVFVSST
CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECC
GVIGVPLPKDKARAGVAAALTAKPCSWEVAAETIGTTDTFAKGAAASAIVGGRTVHVAGI
CEEEECCCCCHHHCCEEEEEECCCCCCCHHHHHCCCCHHHHCCCHHHEEECCCEEEEEEE
AKGSGMIAPDMATMLGYIFTDAAVAPALLQEMLREAAGGTFNAITVDSDTSTSDTVLLFA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEE
TGQAGHAPLAARDDPGADALYAAIRQVALDLAHQVVRDGEGASKFIEVQVTRAVSDDSAK
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC
RVALAIANSPLVKTAIAGEDANWGRVVMAVGKAGEPADRDRLAIRFGDHWVAKDGLAVDG
EEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEECCCEEECC
YDEAPVAAHLKGRDIRIGADLGLGEGRATVWTCDLTHGYISINADYRS
CCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEECCCC
>Mature Secondary Structure 
TIRSPLAPAAFPDLPEIAGVTRRVARARYKDWDRCDLTYIELTPGTTVAGVFTRNICCS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHCCCCC
SEVELGREQVRRGTARALIVNAGNSNAFTGYRGRTAVEAIMAQVADHLGCAAGDVFVSST
CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECC
GVIGVPLPKDKARAGVAAALTAKPCSWEVAAETIGTTDTFAKGAAASAIVGGRTVHVAGI
CEEEECCCCCHHHCCEEEEEECCCCCCCHHHHHCCCCHHHHCCCHHHEEECCCEEEEEEE
AKGSGMIAPDMATMLGYIFTDAAVAPALLQEMLREAAGGTFNAITVDSDTSTSDTVLLFA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEE
TGQAGHAPLAARDDPGADALYAAIRQVALDLAHQVVRDGEGASKFIEVQVTRAVSDDSAK
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC
RVALAIANSPLVKTAIAGEDANWGRVVMAVGKAGEPADRDRLAIRFGDHWVAKDGLAVDG
EEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEECCCEEECC
YDEAPVAAHLKGRDIRIGADLGLGEGRATVWTCDLTHGYISINADYRS
CCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA