| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485637
Identifier: 103485637
GI number: 103485637
Start: 136971
End: 137735
Strand: Direct
Name: 103485637
Synonym: Sala_0141
Alternate gene names: NA
Gene position: 136971-137735 (Clockwise)
Preceding gene: 103485636
Following gene: 103485638
Centisome position: 4.09
GC content: 62.75
Gene sequence:
>765_bases GTGAACGAGTATCAACTTCCCAAATGCCTGCAGGTGATCGGTCTGGCATGCATTCCCGTCAACGACATACCAGACGAGCA TCCGGCGCTGGCACGCAGGCCGGTTGCGGCGGCGGTCCTGACGATGGTCGATCAAGATGATGGTCATCGCTGGATCAACA CGATCTGCGTCTCCGACGCGCGCAAGTCGGAAATCCCATTGCCGCACTTGCTCGACAAGACACTGTTGCCCGGCGTGGTC CAGATCGCGTCCACGACCGATCGCATGACGCTGGCGATGGACGCGATGAGCCGGCGCTTCTTCGTCGAGCCGGCTCTTGC AGAACTCTGTTTTGGCGAGACGGCTATCGATCCCGCCGCGATGGGTGACCATGGGTTCGATGAGCGAACAGCGTGCCGTC GTTTCTCGATCCCGATGCCCGAGATCGGCGATGCGGACATCGAGCTTGCCTGGTCGCGCTCGGCGCCGGCGGCAGCCGAA GACCATGCGCTGCGCGTCGCGACCGCACGCTTGATGCTGTGGGCGCATGTCGAGGCGTTCCGCATCGCGCGACCGGAACC CTTCTTCGAGATCATGCTGGCCCTGCGCGACTGGATCGATGCCAGCGAGTATCTCAAGGCCGCGCTCGCCGATATCGGGA ACTCACGCCCATTCCGCCGTGCAGACTCTTTCGCGCATCATTATCGCGACTATCGACAACGCCTTGCTGCGGGCGACGAA ACCGCGAGATGGGTCAGCTTCGAGGACGGCCTGTTCCACGCCTGA
Upstream 100 bases:
>100_bases CAAGCGGTGGAGACGCTGACGCGGGAAGCGAGGAACAGGGTGAAAGGAAAAGAGGCAGGAGTTCTGTCTCGGATCCCTGA TCCTCCGAAAGGAGAATATC
Downstream 100 bases:
>100_bases GCGCGCCTAACGCGTAAACTCACTATCGATGAAAAAATGGCCTCGCTGCTCGGGTCGCGCGAGCAGCGAGGCCTGCGAGC GTGCATATGCACAACGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDARKSEIPLPHLLDKTLLPGVV QIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAAMGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAE DHALRVATARLMLWAHVEAFRIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE TARWVSFEDGLFHA
Sequences:
>Translated_254_residues MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDARKSEIPLPHLLDKTLLPGVV QIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAAMGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAE DHALRVATARLMLWAHVEAFRIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE TARWVSFEDGLFHA >Mature_254_residues MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDARKSEIPLPHLLDKTLLPGVV QIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAAMGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAE DHALRVATARLMLWAHVEAFRIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE TARWVSFEDGLFHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28454; Mature: 28454
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDA CCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC RKSEIPLPHLLDKTLLPGVVQIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAA CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHH MGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAEDHALRVATARLMLWAHVEAF CCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TARWVSFEDGLFHA CCEEEEECCCCCCC >Mature Secondary Structure MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDA CCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC RKSEIPLPHLLDKTLLPGVVQIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAA CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHH MGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAEDHALRVATARLMLWAHVEAF CCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TARWVSFEDGLFHA CCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA