Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485637

Identifier: 103485637

GI number: 103485637

Start: 136971

End: 137735

Strand: Direct

Name: 103485637

Synonym: Sala_0141

Alternate gene names: NA

Gene position: 136971-137735 (Clockwise)

Preceding gene: 103485636

Following gene: 103485638

Centisome position: 4.09

GC content: 62.75

Gene sequence:

>765_bases
GTGAACGAGTATCAACTTCCCAAATGCCTGCAGGTGATCGGTCTGGCATGCATTCCCGTCAACGACATACCAGACGAGCA
TCCGGCGCTGGCACGCAGGCCGGTTGCGGCGGCGGTCCTGACGATGGTCGATCAAGATGATGGTCATCGCTGGATCAACA
CGATCTGCGTCTCCGACGCGCGCAAGTCGGAAATCCCATTGCCGCACTTGCTCGACAAGACACTGTTGCCCGGCGTGGTC
CAGATCGCGTCCACGACCGATCGCATGACGCTGGCGATGGACGCGATGAGCCGGCGCTTCTTCGTCGAGCCGGCTCTTGC
AGAACTCTGTTTTGGCGAGACGGCTATCGATCCCGCCGCGATGGGTGACCATGGGTTCGATGAGCGAACAGCGTGCCGTC
GTTTCTCGATCCCGATGCCCGAGATCGGCGATGCGGACATCGAGCTTGCCTGGTCGCGCTCGGCGCCGGCGGCAGCCGAA
GACCATGCGCTGCGCGTCGCGACCGCACGCTTGATGCTGTGGGCGCATGTCGAGGCGTTCCGCATCGCGCGACCGGAACC
CTTCTTCGAGATCATGCTGGCCCTGCGCGACTGGATCGATGCCAGCGAGTATCTCAAGGCCGCGCTCGCCGATATCGGGA
ACTCACGCCCATTCCGCCGTGCAGACTCTTTCGCGCATCATTATCGCGACTATCGACAACGCCTTGCTGCGGGCGACGAA
ACCGCGAGATGGGTCAGCTTCGAGGACGGCCTGTTCCACGCCTGA

Upstream 100 bases:

>100_bases
CAAGCGGTGGAGACGCTGACGCGGGAAGCGAGGAACAGGGTGAAAGGAAAAGAGGCAGGAGTTCTGTCTCGGATCCCTGA
TCCTCCGAAAGGAGAATATC

Downstream 100 bases:

>100_bases
GCGCGCCTAACGCGTAAACTCACTATCGATGAAAAAATGGCCTCGCTGCTCGGGTCGCGCGAGCAGCGAGGCCTGCGAGC
GTGCATATGCACAACGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDARKSEIPLPHLLDKTLLPGVV
QIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAAMGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAE
DHALRVATARLMLWAHVEAFRIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE
TARWVSFEDGLFHA

Sequences:

>Translated_254_residues
MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDARKSEIPLPHLLDKTLLPGVV
QIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAAMGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAE
DHALRVATARLMLWAHVEAFRIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE
TARWVSFEDGLFHA
>Mature_254_residues
MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDARKSEIPLPHLLDKTLLPGVV
QIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAAMGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAE
DHALRVATARLMLWAHVEAFRIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE
TARWVSFEDGLFHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28454; Mature: 28454

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDA
CCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
RKSEIPLPHLLDKTLLPGVVQIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAA
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHH
MGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAEDHALRVATARLMLWAHVEAF
CCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
TARWVSFEDGLFHA
CCEEEEECCCCCCC
>Mature Secondary Structure
MNEYQLPKCLQVIGLACIPVNDIPDEHPALARRPVAAAVLTMVDQDDGHRWINTICVSDA
CCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
RKSEIPLPHLLDKTLLPGVVQIASTTDRMTLAMDAMSRRFFVEPALAELCFGETAIDPAA
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHH
MGDHGFDERTACRRFSIPMPEIGDADIELAWSRSAPAAAEDHALRVATARLMLWAHVEAF
CCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RIARPEPFFEIMLALRDWIDASEYLKAALADIGNSRPFRRADSFAHHYRDYRQRLAAGDE
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
TARWVSFEDGLFHA
CCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA