Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485633

Identifier: 103485633

GI number: 103485633

Start: 130887

End: 131660

Strand: Direct

Name: 103485633

Synonym: Sala_0137

Alternate gene names: NA

Gene position: 130887-131660 (Clockwise)

Preceding gene: 103485632

Following gene: 103485635

Centisome position: 3.91

GC content: 62.66

Gene sequence:

>774_bases
GTGGCCGACTTTGATCGCCACGTCGGCGAGCTCCCGTGGGGATGGTGGCTTCGAGCCAATCCGCGCGGCTACGAAGATGC
AGCGGGGCGCAATTGGTCGAGCGTCAGGGACGCCTTCTGGGAAGGAGAACTTGGCTTCCCGCCGGTCCACTTCGCACCCG
AACAGCATGAACTGATGCTGAGGGTCATGACCGCGATCAGTGCGAGCTGGTTTGGCACGGAGAGCAACCACGATGTTTTC
GGCGGGGACATGATGTTCTGGCGATTCTATCAGTGCTGGCTCGCCAGCATCGGTATGGTCGAGACATCGGAGGGGAGGGA
CGTCTTCGATGGGGTGCTGAGCTCATTGGGGAAGTCGGTCCTCATGATGCTGCAGGCCACGCGCGAGCCGGAATTCGAGC
GCCTGCCAATGGCGGCGGTTGTCGCCGCGGTAAGTGCGAGCAAAGGGCTCGACGCCGAGGCGCGGGAGCGGGCGCTGATC
ACCTTTGAGCAGCAGGTTGGATTTCGTCGCCATCTGTTCGCGCGCGAAAATCTGGGAAGGCGATACCTGGTGACGTTGAC
CGGACTTAAGGTTGGCGCGCGGATGCCGACGCGCAATATCGCGTGGTCGCAGTCCTTCGCCGATGCAAATTCGCGCGATG
ATCTCTTCGCCTGGCTCGCCGAGCGGGTGCACCGTTGGGATGATTGGGGGGGAATTGCCCACCGAAAGGGCGCGTCTGCG
CTGACAAGCCATTTGTTGTCGGTCATCGTCGGTGCGGGCGGTCTGGCTCGGTGA

Upstream 100 bases:

>100_bases
CTCGCTGCTCAACTGCGCGCGATCGCGGACGGGGACGCAGCGCCCCAGCGCGACGACCAGCCGCCGCCGATCGGCCTCGA
TCCCAGTCGCGGAGGTGGCC

Downstream 100 bases:

>100_bases
ATCCTATTCGGTGGCGCAATTAGTGCTGTGCTGGCGTGATCACGACGAGGCGGCGCCGCTATTACTGTGCGCGACCGCTA
GCTTAGGCAGCCTCGGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELMLRVMTAISASWFGTESNHDVF
GGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSVLMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALI
TFEQQVGFRRHLFARENLGRRYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA
LTSHLLSVIVGAGGLAR

Sequences:

>Translated_257_residues
MADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELMLRVMTAISASWFGTESNHDVF
GGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSVLMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALI
TFEQQVGFRRHLFARENLGRRYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA
LTSHLLSVIVGAGGLAR
>Mature_256_residues
ADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELMLRVMTAISASWFGTESNHDVFG
GDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSVLMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALIT
FEQQVGFRRHLFARENLGRRYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASAL
TSHLLSVIVGAGGLAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28918; Mature: 28787

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELML
CCCHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
RVMTAISASWFGTESNHDVFGGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSV
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHH
LMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALITFEQQVGFRRHLFARENLGR
HHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHEEEHHHHHHHHHHHHHHCCCC
RYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA
EEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHH
LTSHLLSVIVGAGGLAR
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELML
CCHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
RVMTAISASWFGTESNHDVFGGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSV
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHH
LMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALITFEQQVGFRRHLFARENLGR
HHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHEEEHHHHHHHHHHHHHHCCCC
RYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA
EEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHH
LTSHLLSVIVGAGGLAR
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA