| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485633
Identifier: 103485633
GI number: 103485633
Start: 130887
End: 131660
Strand: Direct
Name: 103485633
Synonym: Sala_0137
Alternate gene names: NA
Gene position: 130887-131660 (Clockwise)
Preceding gene: 103485632
Following gene: 103485635
Centisome position: 3.91
GC content: 62.66
Gene sequence:
>774_bases GTGGCCGACTTTGATCGCCACGTCGGCGAGCTCCCGTGGGGATGGTGGCTTCGAGCCAATCCGCGCGGCTACGAAGATGC AGCGGGGCGCAATTGGTCGAGCGTCAGGGACGCCTTCTGGGAAGGAGAACTTGGCTTCCCGCCGGTCCACTTCGCACCCG AACAGCATGAACTGATGCTGAGGGTCATGACCGCGATCAGTGCGAGCTGGTTTGGCACGGAGAGCAACCACGATGTTTTC GGCGGGGACATGATGTTCTGGCGATTCTATCAGTGCTGGCTCGCCAGCATCGGTATGGTCGAGACATCGGAGGGGAGGGA CGTCTTCGATGGGGTGCTGAGCTCATTGGGGAAGTCGGTCCTCATGATGCTGCAGGCCACGCGCGAGCCGGAATTCGAGC GCCTGCCAATGGCGGCGGTTGTCGCCGCGGTAAGTGCGAGCAAAGGGCTCGACGCCGAGGCGCGGGAGCGGGCGCTGATC ACCTTTGAGCAGCAGGTTGGATTTCGTCGCCATCTGTTCGCGCGCGAAAATCTGGGAAGGCGATACCTGGTGACGTTGAC CGGACTTAAGGTTGGCGCGCGGATGCCGACGCGCAATATCGCGTGGTCGCAGTCCTTCGCCGATGCAAATTCGCGCGATG ATCTCTTCGCCTGGCTCGCCGAGCGGGTGCACCGTTGGGATGATTGGGGGGGAATTGCCCACCGAAAGGGCGCGTCTGCG CTGACAAGCCATTTGTTGTCGGTCATCGTCGGTGCGGGCGGTCTGGCTCGGTGA
Upstream 100 bases:
>100_bases CTCGCTGCTCAACTGCGCGCGATCGCGGACGGGGACGCAGCGCCCCAGCGCGACGACCAGCCGCCGCCGATCGGCCTCGA TCCCAGTCGCGGAGGTGGCC
Downstream 100 bases:
>100_bases ATCCTATTCGGTGGCGCAATTAGTGCTGTGCTGGCGTGATCACGACGAGGCGGCGCCGCTATTACTGTGCGCGACCGCTA GCTTAGGCAGCCTCGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELMLRVMTAISASWFGTESNHDVF GGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSVLMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALI TFEQQVGFRRHLFARENLGRRYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA LTSHLLSVIVGAGGLAR
Sequences:
>Translated_257_residues MADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELMLRVMTAISASWFGTESNHDVF GGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSVLMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALI TFEQQVGFRRHLFARENLGRRYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA LTSHLLSVIVGAGGLAR >Mature_256_residues ADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELMLRVMTAISASWFGTESNHDVFG GDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSVLMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALIT FEQQVGFRRHLFARENLGRRYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASAL TSHLLSVIVGAGGLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28918; Mature: 28787
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELML CCCHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RVMTAISASWFGTESNHDVFGGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHH LMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALITFEQQVGFRRHLFARENLGR HHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHEEEHHHHHHHHHHHHHHCCCC RYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA EEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHH LTSHLLSVIVGAGGLAR HHHHHHHHHHCCCCCCC >Mature Secondary Structure ADFDRHVGELPWGWWLRANPRGYEDAAGRNWSSVRDAFWEGELGFPPVHFAPEQHELML CCHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RVMTAISASWFGTESNHDVFGGDMMFWRFYQCWLASIGMVETSEGRDVFDGVLSSLGKSV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHH LMMLQATREPEFERLPMAAVVAAVSASKGLDAEARERALITFEQQVGFRRHLFARENLGR HHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHEEEHHHHHHHHHHHHHHCCCC RYLVTLTGLKVGARMPTRNIAWSQSFADANSRDDLFAWLAERVHRWDDWGGIAHRKGASA EEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHH LTSHLLSVIVGAGGLAR HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA