Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485579

Identifier: 103485579

GI number: 103485579

Start: 85527

End: 86873

Strand: Reverse

Name: 103485579

Synonym: Sala_0081

Alternate gene names: NA

Gene position: 86873-85527 (Counterclockwise)

Preceding gene: 103485580

Following gene: 103485578

Centisome position: 2.6

GC content: 63.85

Gene sequence:

>1347_bases
ATGTCCCCCGCCAAATCAATTTCGCTCCGCCGCCTGCTGTCCACCGCCATTTCTGTCGCGGCGCTCGGCATGACCCTCCA
GTCCAGCCCGAGCTTCGCCAGCAGCGCTGGCCCGTCCACCGCTATCACGGTCTCGGCCGCTGCGGCGGTCGCCGCACCGC
AAGACGAGTCCATCCGCCCGTTTCATGTGAGCATCCCCGAAGAGGCGCTCACGGATCTTCGCCGCCGTCTCGCCGAGACG
CGCTGGCCCGATCGCGAAAAGGTTTCGGACGCATCGCAGGGTGTGCAACTCGACCGTCTCGAACCCCTCGTCCGTTATTG
GGGCACTGACTATGACTGGCGCAAGGGCGAAGCCCGCCTCAACGCCGTGCCGCAGTTCATCACCACCATCGACGGTCTCG
ACATCCAGTTCATCCACATCCGCTCGAAGCATAAGGGTGCGATGCCGCTGCTCATGACGCACGGCTGGCCCGGCTCACCG
TTCGAGCTGCTGAAAACCGTCGGACCGCTTACCGATCCGACCGCGCACGGCGGGAAGGCCGAAGACGCCTTCGACCTGAT
CATGCCGACCTATCCGGGTTATGGGTTTTCCGGCAAGCCGAACGAGGCATGGGATCCGGCCCGGGTGGCGCGCGCCTGGG
ATGTGCTGATGAAGCGTCTCGGCTACAAGAATTATGTGTCGCAGGGCGGCGATTGGGGCGCGATCATTTCGCAGGTGCTG
GCCGTGCAGGCACCCGAAGGATTGCTTGGCATCCATACCAATATGCCGGGCACCGTTCCGCCGGGCGTTCTCAAGCTCGT
CCGCGCCAAGCAACCGGCTCCGGACAGCTATTCTCCCGAAGAGAAGATCGCCTACGCCGGTCTCGAGACCTTCTACGGCA
AGGGCTTCGGCTATGCCGAAATGATGAACACGCGCCCGCAGACGCTCGGCTACGGCCTGTCGGACTCTCCGGTCGGGCTT
GCAGCTTTCCTCTACGAGAAGATCGCGACCTGGACGGATAGCGGTGGCAATCCCGAAAGCGTGCTGACGCGCGACGAGAT
ACTCGACAACATCACCCTTTACTGGCTGACCAACACCGGAACCTCGTCATCGCGCAGCTATTGGGATGCCGCGCAGGGCC
CGGGCGGTCCGTTCAACGCGATCGAGATCAGCAAGGTGCCGGTCGCGGTGACCGTCTTCCCCGGCGAGATCTATCGCGCG
CCGCGCAGCTGGGGCGAAAAGAGCTTCAAGAAGCTCATCTACTGGAACGAGGTCGACAAGGGCGGTCATTTCGCCGCCTG
GGAACAGCCCGAGCTGTTCGCTGCCGAGATCCGCGCCGCCTTCCGCCCCTTGCGCGAGAAGAAGTGA

Upstream 100 bases:

>100_bases
ATGCTCCCCAATCTGTCGCTGACCAACCCGGCCGATCGATATCGGGCCGTTGCCGCCGCCGCTTGAACGCCCTCGACCAG
TCCGAAACAGGAGAAAGACT

Downstream 100 bases:

>100_bases
ACGACTGACGACCCCCTCATCAAAGGAACAAGATCATGAGCAAGCCCGACAAGATCCTCTACACCGCCAAGACCCACACC
ACCGGAGGCCGCGATGGCAA

Product: epoxide hydrolase-like protein

Products: NA

Alternate protein names: Epoxide hydratase [H]

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSPAKSISLRRLLSTAISVAALGMTLQSSPSFASSAGPSTAITVSAAAAVAAPQDESIRPFHVSIPEEALTDLRRRLAET
RWPDREKVSDASQGVQLDRLEPLVRYWGTDYDWRKGEARLNAVPQFITTIDGLDIQFIHIRSKHKGAMPLLMTHGWPGSP
FELLKTVGPLTDPTAHGGKAEDAFDLIMPTYPGYGFSGKPNEAWDPARVARAWDVLMKRLGYKNYVSQGGDWGAIISQVL
AVQAPEGLLGIHTNMPGTVPPGVLKLVRAKQPAPDSYSPEEKIAYAGLETFYGKGFGYAEMMNTRPQTLGYGLSDSPVGL
AAFLYEKIATWTDSGGNPESVLTRDEILDNITLYWLTNTGTSSSRSYWDAAQGPGGPFNAIEISKVPVAVTVFPGEIYRA
PRSWGEKSFKKLIYWNEVDKGGHFAAWEQPELFAAEIRAAFRPLREKK

Sequences:

>Translated_448_residues
MSPAKSISLRRLLSTAISVAALGMTLQSSPSFASSAGPSTAITVSAAAAVAAPQDESIRPFHVSIPEEALTDLRRRLAET
RWPDREKVSDASQGVQLDRLEPLVRYWGTDYDWRKGEARLNAVPQFITTIDGLDIQFIHIRSKHKGAMPLLMTHGWPGSP
FELLKTVGPLTDPTAHGGKAEDAFDLIMPTYPGYGFSGKPNEAWDPARVARAWDVLMKRLGYKNYVSQGGDWGAIISQVL
AVQAPEGLLGIHTNMPGTVPPGVLKLVRAKQPAPDSYSPEEKIAYAGLETFYGKGFGYAEMMNTRPQTLGYGLSDSPVGL
AAFLYEKIATWTDSGGNPESVLTRDEILDNITLYWLTNTGTSSSRSYWDAAQGPGGPFNAIEISKVPVAVTVFPGEIYRA
PRSWGEKSFKKLIYWNEVDKGGHFAAWEQPELFAAEIRAAFRPLREKK
>Mature_447_residues
SPAKSISLRRLLSTAISVAALGMTLQSSPSFASSAGPSTAITVSAAAAVAAPQDESIRPFHVSIPEEALTDLRRRLAETR
WPDREKVSDASQGVQLDRLEPLVRYWGTDYDWRKGEARLNAVPQFITTIDGLDIQFIHIRSKHKGAMPLLMTHGWPGSPF
ELLKTVGPLTDPTAHGGKAEDAFDLIMPTYPGYGFSGKPNEAWDPARVARAWDVLMKRLGYKNYVSQGGDWGAIISQVLA
VQAPEGLLGIHTNMPGTVPPGVLKLVRAKQPAPDSYSPEEKIAYAGLETFYGKGFGYAEMMNTRPQTLGYGLSDSPVGLA
AFLYEKIATWTDSGGNPESVLTRDEILDNITLYWLTNTGTSSSRSYWDAAQGPGGPFNAIEISKVPVAVTVFPGEIYRAP
RSWGEKSFKKLIYWNEVDKGGHFAAWEQPELFAAEIRAAFRPLREKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

Organism=Homo sapiens, GI4503583, Length=421, Percent_Identity=36.104513064133, Blast_Score=255, Evalue=5e-68,
Organism=Homo sapiens, GI209862837, Length=421, Percent_Identity=36.104513064133, Blast_Score=255, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI17564944, Length=419, Percent_Identity=33.1742243436754, Blast_Score=228, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI193207462, Length=414, Percent_Identity=26.0869565217391, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24655327, Length=405, Percent_Identity=32.5925925925926, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI20130139, Length=402, Percent_Identity=32.089552238806, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI19922580, Length=419, Percent_Identity=29.8329355608592, Blast_Score=175, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =3.3.2.10 [H]

Molecular weight: Translated: 49031; Mature: 48900

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAKSISLRRLLSTAISVAALGMTLQSSPSFASSAGPSTAITVSAAAAVAAPQDESIRP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCC
FHVSIPEEALTDLRRRLAETRWPDREKVSDASQGVQLDRLEPLVRYWGTDYDWRKGEARL
EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHH
NAVPQFITTIDGLDIQFIHIRSKHKGAMPLLMTHGWPGSPFELLKTVGPLTDPTAHGGKA
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCC
EDAFDLIMPTYPGYGFSGKPNEAWDPARVARAWDVLMKRLGYKNYVSQGGDWGAIISQVL
CCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH
AVQAPEGLLGIHTNMPGTVPPGVLKLVRAKQPAPDSYSPEEKIAYAGLETFYGKGFGYAE
HHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
MMNTRPQTLGYGLSDSPVGLAAFLYEKIATWTDSGGNPESVLTRDEILDNITLYWLTNTG
HHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEEECCC
TSSSRSYWDAAQGPGGPFNAIEISKVPVAVTVFPGEIYRAPRSWGEKSFKKLIYWNEVDK
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECHHHHHCCHHHHHHHHHHHHEECCCCC
GGHFAAWEQPELFAAEIRAAFRPLREKK
CCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPAKSISLRRLLSTAISVAALGMTLQSSPSFASSAGPSTAITVSAAAAVAAPQDESIRP
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCC
FHVSIPEEALTDLRRRLAETRWPDREKVSDASQGVQLDRLEPLVRYWGTDYDWRKGEARL
EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHH
NAVPQFITTIDGLDIQFIHIRSKHKGAMPLLMTHGWPGSPFELLKTVGPLTDPTAHGGKA
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCC
EDAFDLIMPTYPGYGFSGKPNEAWDPARVARAWDVLMKRLGYKNYVSQGGDWGAIISQVL
CCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH
AVQAPEGLLGIHTNMPGTVPPGVLKLVRAKQPAPDSYSPEEKIAYAGLETFYGKGFGYAE
HHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
MMNTRPQTLGYGLSDSPVGLAAFLYEKIATWTDSGGNPESVLTRDEILDNITLYWLTNTG
HHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEEECCC
TSSSRSYWDAAQGPGGPFNAIEISKVPVAVTVFPGEIYRAPRSWGEKSFKKLIYWNEVDK
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECHHHHHCCHHHHHHHHHHHHEECCCCC
GGHFAAWEQPELFAAEIRAAFRPLREKK
CCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8226695 [H]