Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485557

Identifier: 103485557

GI number: 103485557

Start: 65272

End: 67644

Strand: Direct

Name: 103485557

Synonym: Sala_0059

Alternate gene names: NA

Gene position: 65272-67644 (Clockwise)

Preceding gene: 103485556

Following gene: 103485558

Centisome position: 1.95

GC content: 65.23

Gene sequence:

>2373_bases
ATGGCTGGCCTCCGATGGATCTTTGACAGGGCTTCCGGCACGCCGCGCGTCGGCTATAGAAGCGCTATGGCCGGCTCCGT
CGCGACGCTCTGGAAACAACTCGATATCCGCTCGAAAGGCTGGCCGGCCCGGCTGCGTGGGCTAATCGTTGTGCGTACCG
GCCATCTCGCCGCCGACGCCCGGCAATCGGCGGGCAACCACCGCGGCAAGATCGAGGGCCTCGGCTGGCTCGCGGTCGCC
GCCGGCGCCATCTTTTCGGTCCCACCGCTTCAATCACTCATCGCACCGCTCCTCGGCAGTGAGGGCGTCGCTACGCTGCG
CGATATGATCATTGCCGCCAGCGGCGCTATGATCGGCGCGACCGCTATTGTTGCATCCTTCATTCTGTTCGCGATGCAGG
TGAATGTCGAACGGCTTCCGTATGGTCTTTTCCATCGCTTCAGTTCCGATGCGCGACTGCTCGGCGGTTTTGCTGCCGCC
TTCATGCTCTCGCTCGGCACGATGGCGCTCGCCTTTATCGAGGATCCAGGTCATTCATCGGCGGTCGTAGTCGCCGCCAT
CCTCGCCGTCGCGCTCATTTTAAGGTTGCTTCTCCACGCCTACCGCCGCTCGCTCCGCCTTATCGACCCGGTGTCGCAGC
TCTCGATGATCGAGGCAGATGCGGCGGCCAAGCTCCGCCGCTGGGACCGCCGCGTGCGGTGGCTGCAGCCGCTACTTGCC
GAAGACCCGGGACCGGGCGAGCCCGCCGCGCGCCGCGAGGGCATGCGTCTCGATGTCCGCCGCGCCGCGATCCTCGAGGG
GAGCAAGGGGTGGGACGGTCCGCTACGCACCGCGATCGGGCAGGCGGCCGCCTTTTCGCGCCAGGCGGCCGAACGCGGCG
ATCTCGAGGTCTCGGCGGCCGCGCTAAACAGCCTGCTCGCGCTCAATCGCGCCTATGTCGCCGTGAAGGGGCGGAGCTTC
CACGCGCGCACCCTGCTGTTCGAGAACCCTCAGGTTACCGACGGAACGATCAACGCGACGCTCGAAGAGCTCCGTCGGCT
GCGCGTGGCCGCGCTCGCAGGTCTCGACGAACCGCATCTCGAACAGCTTTTTAAGGCCCATTTGGGGCTGGTGCGGGCCT
ATCTCGGCATCGAATATCCGGGGCTCAATCCCTCGCCGAGCCATGCGCTGCTCGCAGCCCATTATCTCGAAAGCGCGGTC
GAGGCAGTCATTCCGACACAGATGACCGATACGCTGATGGAAGGCGTCAAATGTCTCGGCGACGCCGCAAGGCTGTTCGC
GAGTGCCGGTCATGCAAGCGCAGCGAGCAGCCTTTTCGGCAAGATCGCGAAGATCGGCGTTGCGGGCGCGATGCAGCGCG
ACGGTTTTCCGGTGGCCGTCGTCGCAATCGAACAGCTTGCCTCGCTCCAACTCAGCTTGTTCTATGGTGACGGCGCGAAT
CATGGCTATGCCACGCGGCAATTGCGCAGCGCCATCTTCACCACCGCAACCGCGATGTTCGCGCTCCCAGATCTGCCGCT
CGCGTCAAAACAGATTACCGCGCTCGCACCTTTCTTTTCGGGCAGCGATCCGCGCGGCTTTCGCTCTTCGCTCACTTCGC
TCGTCAATGCGCTCCATGAGCCGGGCGCCGACGCCGCGATGGCAGCCAAGGTCGCGCACAATATCGTGGAATGGGCCGAC
AAGCTCTATGTCGACGTCCGCGCGCTCCTTAAGCTCGCGATCGAGAAACGCTCGCAGTTCGTCATCGATCTCATCCACTG
GATCACCGGGATGAGCGAGCTTCTCTTTTTTGCCGCCAAGGCGCCCGCGACGGCTCATCATGACCGCTCCACTCTGGAAA
AGCAGGCGCATTTTCTTATTGGCTCGCTGACCTTCATTCCGCGCGATCCGGAGACGGCGAAATGGATCGAGGCCTTCTCG
CTGATCGATATCCTGTTCGAGTTCGGATCGATGGCGAGCGAGCGCGAATGGCTGGAAGGCTTCGACACCGCCTTCGACGC
GCTGCTGCGCTGGGGCTTCGAAGCCGGTGCCGAAAACACCGGCTGGAACACGCTCGACAGCGCGCTCGCGGCGCTCGCGG
CGCTGACGATCGGCGAGGACGCCGCGCTGCAAACCCGTCTCATTGCCGCGGTGCAGGCGGCGGTCGCAGCCGAAGGCGCG
CCCGCAGCGCCCGTGCGCGAGCGCGCCGCGCGCTTCCTGCGCGGCCGCGCCGATCATCTGCACAGCAGCGATTTCGATAC
CGACGCGGTCAACCTCGCTCTCTGCGCCGATATCCCTGCCGCCCGCGCCTTGCTTGCCGAGATCGCTGAACTTCTGGCGC
CTTTACTCCCTCCGCCGCCCATTCCGCCGGCGCCGGCGCCTCCGGATGGGTAG

Upstream 100 bases:

>100_bases
CGTTGCGGAAGGGCGCAGCCATCCATGCCACCAAAGCCGCGGAGCGGAAAATAGCCGAAGGCCTTGAGCTGCTCGATCTC
TGACGGCTTGAATAGCCTCC

Downstream 100 bases:

>100_bases
GTCCGCCCATCCGCGGCCCACGTGCGAAGTCATGTCAGATCGTCAGCCAGTCGCCCTACAGCCAAATAACGCCGGAAGGA
GCGCGTCTCCCGATGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 790; Mature: 789

Protein sequence:

>790_residues
MAGLRWIFDRASGTPRVGYRSAMAGSVATLWKQLDIRSKGWPARLRGLIVVRTGHLAADARQSAGNHRGKIEGLGWLAVA
AGAIFSVPPLQSLIAPLLGSEGVATLRDMIIAASGAMIGATAIVASFILFAMQVNVERLPYGLFHRFSSDARLLGGFAAA
FMLSLGTMALAFIEDPGHSSAVVVAAILAVALILRLLLHAYRRSLRLIDPVSQLSMIEADAAAKLRRWDRRVRWLQPLLA
EDPGPGEPAARREGMRLDVRRAAILEGSKGWDGPLRTAIGQAAAFSRQAAERGDLEVSAAALNSLLALNRAYVAVKGRSF
HARTLLFENPQVTDGTINATLEELRRLRVAALAGLDEPHLEQLFKAHLGLVRAYLGIEYPGLNPSPSHALLAAHYLESAV
EAVIPTQMTDTLMEGVKCLGDAARLFASAGHASAASSLFGKIAKIGVAGAMQRDGFPVAVVAIEQLASLQLSLFYGDGAN
HGYATRQLRSAIFTTATAMFALPDLPLASKQITALAPFFSGSDPRGFRSSLTSLVNALHEPGADAAMAAKVAHNIVEWAD
KLYVDVRALLKLAIEKRSQFVIDLIHWITGMSELLFFAAKAPATAHHDRSTLEKQAHFLIGSLTFIPRDPETAKWIEAFS
LIDILFEFGSMASEREWLEGFDTAFDALLRWGFEAGAENTGWNTLDSALAALAALTIGEDAALQTRLIAAVQAAVAAEGA
PAAPVRERAARFLRGRADHLHSSDFDTDAVNLALCADIPAARALLAEIAELLAPLLPPPPIPPAPAPPDG

Sequences:

>Translated_790_residues
MAGLRWIFDRASGTPRVGYRSAMAGSVATLWKQLDIRSKGWPARLRGLIVVRTGHLAADARQSAGNHRGKIEGLGWLAVA
AGAIFSVPPLQSLIAPLLGSEGVATLRDMIIAASGAMIGATAIVASFILFAMQVNVERLPYGLFHRFSSDARLLGGFAAA
FMLSLGTMALAFIEDPGHSSAVVVAAILAVALILRLLLHAYRRSLRLIDPVSQLSMIEADAAAKLRRWDRRVRWLQPLLA
EDPGPGEPAARREGMRLDVRRAAILEGSKGWDGPLRTAIGQAAAFSRQAAERGDLEVSAAALNSLLALNRAYVAVKGRSF
HARTLLFENPQVTDGTINATLEELRRLRVAALAGLDEPHLEQLFKAHLGLVRAYLGIEYPGLNPSPSHALLAAHYLESAV
EAVIPTQMTDTLMEGVKCLGDAARLFASAGHASAASSLFGKIAKIGVAGAMQRDGFPVAVVAIEQLASLQLSLFYGDGAN
HGYATRQLRSAIFTTATAMFALPDLPLASKQITALAPFFSGSDPRGFRSSLTSLVNALHEPGADAAMAAKVAHNIVEWAD
KLYVDVRALLKLAIEKRSQFVIDLIHWITGMSELLFFAAKAPATAHHDRSTLEKQAHFLIGSLTFIPRDPETAKWIEAFS
LIDILFEFGSMASEREWLEGFDTAFDALLRWGFEAGAENTGWNTLDSALAALAALTIGEDAALQTRLIAAVQAAVAAEGA
PAAPVRERAARFLRGRADHLHSSDFDTDAVNLALCADIPAARALLAEIAELLAPLLPPPPIPPAPAPPDG
>Mature_789_residues
AGLRWIFDRASGTPRVGYRSAMAGSVATLWKQLDIRSKGWPARLRGLIVVRTGHLAADARQSAGNHRGKIEGLGWLAVAA
GAIFSVPPLQSLIAPLLGSEGVATLRDMIIAASGAMIGATAIVASFILFAMQVNVERLPYGLFHRFSSDARLLGGFAAAF
MLSLGTMALAFIEDPGHSSAVVVAAILAVALILRLLLHAYRRSLRLIDPVSQLSMIEADAAAKLRRWDRRVRWLQPLLAE
DPGPGEPAARREGMRLDVRRAAILEGSKGWDGPLRTAIGQAAAFSRQAAERGDLEVSAAALNSLLALNRAYVAVKGRSFH
ARTLLFENPQVTDGTINATLEELRRLRVAALAGLDEPHLEQLFKAHLGLVRAYLGIEYPGLNPSPSHALLAAHYLESAVE
AVIPTQMTDTLMEGVKCLGDAARLFASAGHASAASSLFGKIAKIGVAGAMQRDGFPVAVVAIEQLASLQLSLFYGDGANH
GYATRQLRSAIFTTATAMFALPDLPLASKQITALAPFFSGSDPRGFRSSLTSLVNALHEPGADAAMAAKVAHNIVEWADK
LYVDVRALLKLAIEKRSQFVIDLIHWITGMSELLFFAAKAPATAHHDRSTLEKQAHFLIGSLTFIPRDPETAKWIEAFSL
IDILFEFGSMASEREWLEGFDTAFDALLRWGFEAGAENTGWNTLDSALAALAALTIGEDAALQTRLIAAVQAAVAAEGAP
AAPVRERAARFLRGRADHLHSSDFDTDAVNLALCADIPAARALLAEIAELLAPLLPPPPIPPAPAPPDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84335; Mature: 84204

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLRWIFDRASGTPRVGYRSAMAGSVATLWKQLDIRSKGWPARLRGLIVVRTGHLAADA
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCHHHHH
RQSAGNHRGKIEGLGWLAVAAGAIFSVPPLQSLIAPLLGSEGVATLRDMIIAASGAMIGA
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
TAIVASFILFAMQVNVERLPYGLFHRFSSDARLLGGFAAAFMLSLGTMALAFIEDPGHSS
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
AVVVAAILAVALILRLLLHAYRRSLRLIDPVSQLSMIEADAAAKLRRWDRRVRWLQPLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDPGPGEPAARREGMRLDVRRAAILEGSKGWDGPLRTAIGQAAAFSRQAAERGDLEVSAA
CCCCCCCCHHHHCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALNSLLALNRAYVAVKGRSFHARTLLFENPQVTDGTINATLEELRRLRVAALAGLDEPHL
HHHHHHHHHHHEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
EQLFKAHLGLVRAYLGIEYPGLNPSPSHALLAAHYLESAVEAVIPTQMTDTLMEGVKCLG
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DAARLFASAGHASAASSLFGKIAKIGVAGAMQRDGFPVAVVAIEQLASLQLSLFYGDGAN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCC
HGYATRQLRSAIFTTATAMFALPDLPLASKQITALAPFFSGSDPRGFRSSLTSLVNALHE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
PGADAAMAAKVAHNIVEWADKLYVDVRALLKLAIEKRSQFVIDLIHWITGMSELLFFAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APATAHHDRSTLEKQAHFLIGSLTFIPRDPETAKWIEAFSLIDILFEFGSMASEREWLEG
CCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FDTAFDALLRWGFEAGAENTGWNTLDSALAALAALTIGEDAALQTRLIAAVQAAVAAEGA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PAAPVRERAARFLRGRADHLHSSDFDTDAVNLALCADIPAARALLAEIAELLAPLLPPPP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHCCCCCC
IPPAPAPPDG
CCCCCCCCCC
>Mature Secondary Structure 
AGLRWIFDRASGTPRVGYRSAMAGSVATLWKQLDIRSKGWPARLRGLIVVRTGHLAADA
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCHHHHH
RQSAGNHRGKIEGLGWLAVAAGAIFSVPPLQSLIAPLLGSEGVATLRDMIIAASGAMIGA
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
TAIVASFILFAMQVNVERLPYGLFHRFSSDARLLGGFAAAFMLSLGTMALAFIEDPGHSS
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
AVVVAAILAVALILRLLLHAYRRSLRLIDPVSQLSMIEADAAAKLRRWDRRVRWLQPLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDPGPGEPAARREGMRLDVRRAAILEGSKGWDGPLRTAIGQAAAFSRQAAERGDLEVSAA
CCCCCCCCHHHHCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALNSLLALNRAYVAVKGRSFHARTLLFENPQVTDGTINATLEELRRLRVAALAGLDEPHL
HHHHHHHHHHHEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
EQLFKAHLGLVRAYLGIEYPGLNPSPSHALLAAHYLESAVEAVIPTQMTDTLMEGVKCLG
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DAARLFASAGHASAASSLFGKIAKIGVAGAMQRDGFPVAVVAIEQLASLQLSLFYGDGAN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCC
HGYATRQLRSAIFTTATAMFALPDLPLASKQITALAPFFSGSDPRGFRSSLTSLVNALHE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
PGADAAMAAKVAHNIVEWADKLYVDVRALLKLAIEKRSQFVIDLIHWITGMSELLFFAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APATAHHDRSTLEKQAHFLIGSLTFIPRDPETAKWIEAFSLIDILFEFGSMASEREWLEG
CCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FDTAFDALLRWGFEAGAENTGWNTLDSALAALAALTIGEDAALQTRLIAAVQAAVAAEGA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PAAPVRERAARFLRGRADHLHSSDFDTDAVNLALCADIPAARALLAEIAELLAPLLPPPP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHCCCCCC
IPPAPAPPDG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA