| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485517
Identifier: 103485517
GI number: 103485517
Start: 13851
End: 14285
Strand: Reverse
Name: 103485517
Synonym: Sala_0019
Alternate gene names: NA
Gene position: 14285-13851 (Counterclockwise)
Preceding gene: 103485518
Following gene: 103485516
Centisome position: 0.43
GC content: 65.75
Gene sequence:
>435_bases ATGCCCCGGATGATTTTCGTGAACCTGCCCGTCACCGACCTCGACAGATCGAAGGCCTTTTACGAGGCGGTCGGCGCGGT CAACAATCCCGCCTTCACCGACGAGACCGCCGCCTGCATGGTCGTCGAGGAAGGGTCGATCCACGTCATGCTGCTCAGCC ATGAAAAATGGGCGAGCTTCACGTCGAAGATGATCCCCGACGCGCGCACGACCGCGCAGGTGCTGCTCTGCGTTTCGGCC GACAGCCGCGAGGCAGTCGACGGACAGGTCGACAAGGCGGTCAAGGCGGGCGGCAAGGCCGACCCGACCCCGACGCAGGA TTTCGGCTTCATGTACGGCCGCAGCTTCGAAGACCCCGACGGCCACATCTGGGAAGTGATGTGGATGGACCCCGCCGCGA TCCCCGCCGGCGAACCCGCCGAAGCCGCCGCCTGA
Upstream 100 bases:
>100_bases CCATGTTGTTCGAACGGAGCGCCGCATGATGATGTCCCACATAATTGCCCCGGCGCGCCGATCGCGCTGACCTGATCCCC CCAAGAAAAGGAGAAAGACG
Downstream 100 bases:
>100_bases CCCGGCAGGCGATGGCGCGCTCTCCCTGTCTCGCCATCGCCTGTTTACCCCCGCAGCCCGAAAGGCCGCTTGCATGTCCT TCCAAGCCTATCTCGACAAT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Glyoxalase; Glyoxalase/Bleomycin Resistance; Lactoylglutathione Lyase-Like Protein; Glyoxalase/Bleomycin Resistance Protein/ Dioxygenase
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPRMIFVNLPVTDLDRSKAFYEAVGAVNNPAFTDETAACMVVEEGSIHVMLLSHEKWASFTSKMIPDARTTAQVLLCVSA DSREAVDGQVDKAVKAGGKADPTPTQDFGFMYGRSFEDPDGHIWEVMWMDPAAIPAGEPAEAAA
Sequences:
>Translated_144_residues MPRMIFVNLPVTDLDRSKAFYEAVGAVNNPAFTDETAACMVVEEGSIHVMLLSHEKWASFTSKMIPDARTTAQVLLCVSA DSREAVDGQVDKAVKAGGKADPTPTQDFGFMYGRSFEDPDGHIWEVMWMDPAAIPAGEPAEAAA >Mature_143_residues PRMIFVNLPVTDLDRSKAFYEAVGAVNNPAFTDETAACMVVEEGSIHVMLLSHEKWASFTSKMIPDARTTAQVLLCVSAD SREAVDGQVDKAVKAGGKADPTPTQDFGFMYGRSFEDPDGHIWEVMWMDPAAIPAGEPAEAAA
Specific function: Unknown
COG id: COG3607
COG function: function code R; Predicted lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15566; Mature: 15434
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRMIFVNLPVTDLDRSKAFYEAVGAVNNPAFTDETAACMVVEEGSIHVMLLSHEKWASF CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEECCHHHHH TSKMIPDARTTAQVLLCVSADSREAVDGQVDKAVKAGGKADPTPTQDFGFMYGRSFEDPD HHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCC GHIWEVMWMDPAAIPAGEPAEAAA CCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PRMIFVNLPVTDLDRSKAFYEAVGAVNNPAFTDETAACMVVEEGSIHVMLLSHEKWASF CCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEECCHHHHH TSKMIPDARTTAQVLLCVSADSREAVDGQVDKAVKAGGKADPTPTQDFGFMYGRSFEDPD HHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCC GHIWEVMWMDPAAIPAGEPAEAAA CCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA