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The map label for this gene is ftsY [H]

Identifier: 197294840

GI number: 197294840

Start: 854368

End: 855363

Strand: Reverse

Name: ftsY [H]

Synonym: PAa_0827

Alternate gene names: 197294840

Gene position: 855363-854368 (Counterclockwise)

Preceding gene: 197294841

Following gene: 197294839

Centisome position: 97.2

GC content: 30.12

Gene sequence:

>996_bases
ATGTTTCAATGGTTTAAAAATAAATTTTTTAAAAAGAAGAATAGTGATAAATATCAGTTAGGGTTGGCAAAAACAAAAGG
CAATTTTGTTAATTTTGAAACTCTTTTAAAAGAAGCTAAAAATATTGAAGAATCTTTATTATCTGCTTTAGAAAATATCC
TTATAGAAAGTGATTTTGGCGTTAAAACAACGCTTTTTTTAATGCAGTCTATCAAAAACTATCTGAATCAATCAAATATT
AAAGAAGCGCGTCAATTACCATCAATTATTATCAAACATTTGCTTCACCTATATCAAGATAGTTCCAAACAATCACAAAC
CCCAATTTTGAACACCAATTCCAAAACTACTCTTACTGACCCTCAAATGTATTTGTTTGTTGGTGTTAACGGTGTTGGAA
AAACTACCACTATCGGAAAAATGGCAACTAAGTTGAGACAAGAAGGTAAAAAAGTTCTTTTAGTTGCAGGCGATACTTTT
CGCGCAGGAGCGGTTGAACAATTAAAAATTTGGGGCAATTGGTCTCAAACAGAAGTTTTTGCTAAAGAAGGAACACTTTT
CCCAAGTCCTTCAAGTGTTATTTTTGAAGGCTTGCAATATGCTAAAAAAAACGCTTATGATGTAGTTTTATGCGATACTG
CAGGAAGATTGCAAAACAAGGCTAATTTAATGCAAGAATTAGCCAAAATTCAAAGAGTTATTTTAAAACATTTAAATCCT
GAAAACTTACAATCTTTTTTAGTGCTTGATGCAAACACAGGCCAAAACGCCTTAAATCAAGTAGAATTATTTAATGAAGC
AGTCCCTTTAACAGGAGCAATTATAACTAAACTTGACGGAACTTCCAAGGGCGGTATTGTCTTTGCTATCAAACATTTAT
ATAATTTATCAATTAAATTTATTGGTTTAGGAGAAAAACCCGAAGATTTAGTCGATTTTGATATTCAAAATTATCTTTTT
CATTTATTTAACAATTTTTTTCTGAAAAATATTTAA

Upstream 100 bases:

>100_bases
TTTATAACGATTCTTTTTTCTAAAAAATTAACTTCCAAAACTAACTTTTTTTAGTTATAATAATTATAGTATACTAAGTT
TGACAAATGAGGTTGAAGAA

Downstream 100 bases:

>100_bases
AGGAGTAAAGCTATTCAAATGAGTATATTAGGAGATGGATTTCAAAAAATCATTAATAAAATCAGAGGCAAAAAAATAAT
TGAATCTCGAGATATTGAAA

Product: Signal recognition particle-docking protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFQWFKNKFFKKKNSDKYQLGLAKTKGNFVNFETLLKEAKNIEESLLSALENILIESDFGVKTTLFLMQSIKNYLNQSNI
KEARQLPSIIIKHLLHLYQDSSKQSQTPILNTNSKTTLTDPQMYLFVGVNGVGKTTTIGKMATKLRQEGKKVLLVAGDTF
RAGAVEQLKIWGNWSQTEVFAKEGTLFPSPSSVIFEGLQYAKKNAYDVVLCDTAGRLQNKANLMQELAKIQRVILKHLNP
ENLQSFLVLDANTGQNALNQVELFNEAVPLTGAIITKLDGTSKGGIVFAIKHLYNLSIKFIGLGEKPEDLVDFDIQNYLF
HLFNNFFLKNI

Sequences:

>Translated_331_residues
MFQWFKNKFFKKKNSDKYQLGLAKTKGNFVNFETLLKEAKNIEESLLSALENILIESDFGVKTTLFLMQSIKNYLNQSNI
KEARQLPSIIIKHLLHLYQDSSKQSQTPILNTNSKTTLTDPQMYLFVGVNGVGKTTTIGKMATKLRQEGKKVLLVAGDTF
RAGAVEQLKIWGNWSQTEVFAKEGTLFPSPSSVIFEGLQYAKKNAYDVVLCDTAGRLQNKANLMQELAKIQRVILKHLNP
ENLQSFLVLDANTGQNALNQVELFNEAVPLTGAIITKLDGTSKGGIVFAIKHLYNLSIKFIGLGEKPEDLVDFDIQNYLF
HLFNNFFLKNI
>Mature_331_residues
MFQWFKNKFFKKKNSDKYQLGLAKTKGNFVNFETLLKEAKNIEESLLSALENILIESDFGVKTTLFLMQSIKNYLNQSNI
KEARQLPSIIIKHLLHLYQDSSKQSQTPILNTNSKTTLTDPQMYLFVGVNGVGKTTTIGKMATKLRQEGKKVLLVAGDTF
RAGAVEQLKIWGNWSQTEVFAKEGTLFPSPSSVIFEGLQYAKKNAYDVVLCDTAGRLQNKANLMQELAKIQRVILKHLNP
ENLQSFLVLDANTGQNALNQVELFNEAVPLTGAIITKLDGTSKGGIVFAIKHLYNLSIKFIGLGEKPEDLVDFDIQNYLF
HLFNNFFLKNI

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=283, Percent_Identity=28.2685512367491, Blast_Score=114, Evalue=9e-26,
Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=32, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI23308697, Length=297, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI295424842, Length=302, Percent_Identity=29.1390728476821, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1789874, Length=268, Percent_Identity=42.910447761194, Blast_Score=210, Evalue=9e-56,
Organism=Escherichia coli, GI1788963, Length=194, Percent_Identity=39.1752577319588, Blast_Score=142, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=291, Percent_Identity=27.8350515463918, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI193206261, Length=220, Percent_Identity=34.0909090909091, Blast_Score=107, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=208, Percent_Identity=35.0961538461538, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320498, Length=219, Percent_Identity=30.5936073059361, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17647949, Length=288, Percent_Identity=28.125, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24641198, Length=212, Percent_Identity=31.1320754716981, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 37322; Mature: 37322

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQWFKNKFFKKKNSDKYQLGLAKTKGNFVNFETLLKEAKNIEESLLSALENILIESDFG
CCCHHHHHHHCCCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKTTLFLMQSIKNYLNQSNIKEARQLPSIIIKHLLHLYQDSSKQSQTPILNTNSKTTLTD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEECC
PQMYLFVGVNGVGKTTTIGKMATKLRQEGKKVLLVAGDTFRAGAVEQLKIWGNWSQTEVF
CEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCHHEEE
AKEGTLFPSPSSVIFEGLQYAKKNAYDVVLCDTAGRLQNKANLMQELAKIQRVILKHLNP
HHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ENLQSFLVLDANTGQNALNQVELFNEAVPLTGAIITKLDGTSKGGIVFAIKHLYNLSIKF
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCEEEEEHHHCCEEEE
IGLGEKPEDLVDFDIQNYLFHLFNNFFLKNI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFQWFKNKFFKKKNSDKYQLGLAKTKGNFVNFETLLKEAKNIEESLLSALENILIESDFG
CCCHHHHHHHCCCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKTTLFLMQSIKNYLNQSNIKEARQLPSIIIKHLLHLYQDSSKQSQTPILNTNSKTTLTD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEECC
PQMYLFVGVNGVGKTTTIGKMATKLRQEGKKVLLVAGDTFRAGAVEQLKIWGNWSQTEVF
CEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCHHEEE
AKEGTLFPSPSSVIFEGLQYAKKNAYDVVLCDTAGRLQNKANLMQELAKIQRVILKHLNP
HHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ENLQSFLVLDANTGQNALNQVELFNEAVPLTGAIITKLDGTSKGGIVFAIKHLYNLSIKF
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCEEEEEHHHCCEEEE
IGLGEKPEDLVDFDIQNYLFHLFNNFFLKNI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]