| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is yloV [H]
Identifier: 197294833
GI number: 197294833
Start: 842798
End: 844462
Strand: Direct
Name: yloV [H]
Synonym: PAa_0819
Alternate gene names: 197294833
Gene position: 842798-844462 (Clockwise)
Preceding gene: 197294831
Following gene: 197294834
Centisome position: 95.78
GC content: 28.35
Gene sequence:
>1665_bases ATGATGAAAGAGAAAAAAATGAAGAAAAACAAGACAATCACAAATATCGATGGTATACTTTTTCAAAAAATGATTATCAA CGGAGCTGTTAATTTACACAATAATTATCACAAAATTGATAATTTAAATGTTTTTCCAGTTCCTGATAGAGATACAGGCA CCAACATGAAAATCACTATGATGTCAGGTGTTGAAGCTATCAAAAATTTAAAAAATGATTCAATTGTTGAAGTTTCACAA ATTTTATCAAAAGCTTTGTTGTTGGGCGCCAAAGGAAATTCAGGCGTTATTTTATCGCAATTTTTTGCAGGAATGGGAGA AACTTTTGCCAAATTACAAAAGAACTCAATTCACCTTGAAGAATTTATGCAATCTTTGGAAAACGGTTATAAAAAAGCAT ATCAAGCAATTATTAAACCAACTGAAGGGACTATTTTAACTGTTTTTCGACTGGCTGTTGAAAAAACAAGCGAACAAAAA AATAAATTTACATCTATAATTGATTTAATAGAACTTTTTTTAAACAACGCTAAAGAAGCTTTAAAACAAACAACTAATTT ATTAGCAGTTTTGAAAAAAGCTGGAGTAGTTGATAGCGGTGGGGCTGGTTTTGTGGAAATCTTAAAAGGTTGGTTGCACT TCTTCAAAGAAAATCAAATGATTGAATTAAAAGATACATCCATCAAAACAGAAACCGCTCATCATATTCATCATTTAGGA GAAGTAGATATTAAATACATTTACTGCACTGAGTATGTTTTTGAATTAAAAAATAATGATTGTGACACCGAAGAATTAGG AGCTTATTTTGAAACAAAAGGTGATTCTTTAGTATTGGTCAAAGACGAAGAAATCTTGAAAATACACATCCACACTAACT GTCCTGGAACTATTTTAGAAAAACTTTTAAATTATGGAAATTTAAAAATTAGTAAAATCGATAATATGAAAGAACAGCAC CAAAAAATCATCGATGAAAAACCCACTTCAGAAAAAAAACAACATTCTTTGATTGTTTTTGTCAAAGATGCCAAAATGGA AAAATTATTAAGTGATTTTGAGATTAATTATATTATTCCACAAAAAGATTTTACAAAAGAAGCGTTATTAAAAGTAATTA ACCAAATTGATTCTCCATATATCTTTATTTTCCCTAACAATTTAGAAACATTAAATGAATTGAAAAAAAATACTATTCTT TCCCAAAAAGATCAAAAAATTATTATTGCACCAAGCAAAAACATTGCTCAAACATACAGCGCTCTTCTAGCATTTGATCC ATCATTAGATTGGGACCAAAACCAAGAAATGATTGAAAACACAATTAAAAACATTCAAATAGGAGAAATTATTGCTGCTG ATAAAATGAATGAAAAGCTTGCAATAAATAAAGAAATCGATATCGCAAAAGAAAGTTATTTATCCATTTATGAAGGGGAG GTGGTTGCTGCAAAACCAAACAAATATGAAGCAATCAACACTCTTTTAAAAAAAATGATTAAACCTTGTCAAAGTTTTTT AACTATTTTTTATAATTCTTCCGTCACAAACACTCACGAATTAGCTGAAATTGAAAAATATTTGAAAAAAAATTACGATC ACTTAGAATTAGAAATTCTTGCAAATGAAGGAGTGGAAGCTGCTTATATTTTATCATTAGAATAA
Upstream 100 bases:
>100_bases TATTTTGTATTTATATTTGTTTTTTATTAGTTTATTAGTAAAAAAACCTTAACTGTTTAGAAAAAATAAAATTTAAAATG ACTAAAAAAATTAAAAAATT
Downstream 100 bases:
>100_bases AAAAAATAAAAATGGTCTTCAAAAGATCATTTTTATATTTACCGCGGGTATGACGGAATGGTAGACGTGCATGTTTGAGG GACATGTAAGATTTTTCTTG
Product: Putative kinase related to dihydroxyacetone kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MMKEKKMKKNKTITNIDGILFQKMIINGAVNLHNNYHKIDNLNVFPVPDRDTGTNMKITMMSGVEAIKNLKNDSIVEVSQ ILSKALLLGAKGNSGVILSQFFAGMGETFAKLQKNSIHLEEFMQSLENGYKKAYQAIIKPTEGTILTVFRLAVEKTSEQK NKFTSIIDLIELFLNNAKEALKQTTNLLAVLKKAGVVDSGGAGFVEILKGWLHFFKENQMIELKDTSIKTETAHHIHHLG EVDIKYIYCTEYVFELKNNDCDTEELGAYFETKGDSLVLVKDEEILKIHIHTNCPGTILEKLLNYGNLKISKIDNMKEQH QKIIDEKPTSEKKQHSLIVFVKDAKMEKLLSDFEINYIIPQKDFTKEALLKVINQIDSPYIFIFPNNLETLNELKKNTIL SQKDQKIIIAPSKNIAQTYSALLAFDPSLDWDQNQEMIENTIKNIQIGEIIAADKMNEKLAINKEIDIAKESYLSIYEGE VVAAKPNKYEAINTLLKKMIKPCQSFLTIFYNSSVTNTHELAEIEKYLKKNYDHLELEILANEGVEAAYILSLE
Sequences:
>Translated_554_residues MMKEKKMKKNKTITNIDGILFQKMIINGAVNLHNNYHKIDNLNVFPVPDRDTGTNMKITMMSGVEAIKNLKNDSIVEVSQ ILSKALLLGAKGNSGVILSQFFAGMGETFAKLQKNSIHLEEFMQSLENGYKKAYQAIIKPTEGTILTVFRLAVEKTSEQK NKFTSIIDLIELFLNNAKEALKQTTNLLAVLKKAGVVDSGGAGFVEILKGWLHFFKENQMIELKDTSIKTETAHHIHHLG EVDIKYIYCTEYVFELKNNDCDTEELGAYFETKGDSLVLVKDEEILKIHIHTNCPGTILEKLLNYGNLKISKIDNMKEQH QKIIDEKPTSEKKQHSLIVFVKDAKMEKLLSDFEINYIIPQKDFTKEALLKVINQIDSPYIFIFPNNLETLNELKKNTIL SQKDQKIIIAPSKNIAQTYSALLAFDPSLDWDQNQEMIENTIKNIQIGEIIAADKMNEKLAINKEIDIAKESYLSIYEGE VVAAKPNKYEAINTLLKKMIKPCQSFLTIFYNSSVTNTHELAEIEKYLKKNYDHLELEILANEGVEAAYILSLE >Mature_554_residues MMKEKKMKKNKTITNIDGILFQKMIINGAVNLHNNYHKIDNLNVFPVPDRDTGTNMKITMMSGVEAIKNLKNDSIVEVSQ ILSKALLLGAKGNSGVILSQFFAGMGETFAKLQKNSIHLEEFMQSLENGYKKAYQAIIKPTEGTILTVFRLAVEKTSEQK NKFTSIIDLIELFLNNAKEALKQTTNLLAVLKKAGVVDSGGAGFVEILKGWLHFFKENQMIELKDTSIKTETAHHIHHLG EVDIKYIYCTEYVFELKNNDCDTEELGAYFETKGDSLVLVKDEEILKIHIHTNCPGTILEKLLNYGNLKISKIDNMKEQH QKIIDEKPTSEKKQHSLIVFVKDAKMEKLLSDFEINYIIPQKDFTKEALLKVINQIDSPYIFIFPNNLETLNELKKNTIL SQKDQKIIIAPSKNIAQTYSALLAFDPSLDWDQNQEMIENTIKNIQIGEIIAADKMNEKLAINKEIDIAKESYLSIYEGE VVAAKPNKYEAINTLLKKMIKPCQSFLTIFYNSSVTNTHELAEIEKYLKKNYDHLELEILANEGVEAAYILSLE
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 62982; Mature: 62982
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKEKKMKKNKTITNIDGILFQKMIINGAVNLHNNYHKIDNLNVFPVPDRDTGTNMKITM CCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCEECCCEEEEECCCCCCCCCEEEEE MSGVEAIKNLKNDSIVEVSQILSKALLLGAKGNSGVILSQFFAGMGETFAKLQKNSIHLE HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHH EFMQSLENGYKKAYQAIIKPTEGTILTVFRLAVEKTSEQKNKFTSIIDLIELFLNNAKEA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQTTNLLAVLKKAGVVDSGGAGFVEILKGWLHFFKENQMIELKDTSIKTETAHHIHHLG HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCC EVDIKYIYCTEYVFELKNNDCDTEELGAYFETKGDSLVLVKDEEILKIHIHTNCPGTILE CCEEEEEEEEHHHHHHCCCCCCHHHHCCCEECCCCEEEEEECCCEEEEEEECCCCHHHHH KLLNYGNLKISKIDNMKEQHQKIIDEKPTSEKKQHSLIVFVKDAKMEKLLSDFEINYIIP HHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHCCCEEEEEC QKDFTKEALLKVINQIDSPYIFIFPNNLETLNELKKNTILSQKDQKIIIAPSKNIAQTYS CCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH ALLAFDPSLDWDQNQEMIENTIKNIQIGEIIAADKMNEKLAINKEIDIAKESYLSIYEGE HHHHCCCCCCCCCCHHHHHHHHHCCCHHHEEECCCCCCCEEECCCCCHHHHHHHHHCCCE VVAAKPNKYEAINTLLKKMIKPCQSFLTIFYNSSVTNTHELAEIEKYLKKNYDHLELEIL EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEE ANEGVEAAYILSLE ECCCCCEEEEEEEC >Mature Secondary Structure MMKEKKMKKNKTITNIDGILFQKMIINGAVNLHNNYHKIDNLNVFPVPDRDTGTNMKITM CCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCEECCCEEEEECCCCCCCCCEEEEE MSGVEAIKNLKNDSIVEVSQILSKALLLGAKGNSGVILSQFFAGMGETFAKLQKNSIHLE HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHH EFMQSLENGYKKAYQAIIKPTEGTILTVFRLAVEKTSEQKNKFTSIIDLIELFLNNAKEA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQTTNLLAVLKKAGVVDSGGAGFVEILKGWLHFFKENQMIELKDTSIKTETAHHIHHLG HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCC EVDIKYIYCTEYVFELKNNDCDTEELGAYFETKGDSLVLVKDEEILKIHIHTNCPGTILE CCEEEEEEEEHHHHHHCCCCCCHHHHCCCEECCCCEEEEEECCCEEEEEEECCCCHHHHH KLLNYGNLKISKIDNMKEQHQKIIDEKPTSEKKQHSLIVFVKDAKMEKLLSDFEINYIIP HHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHCCCEEEEEC QKDFTKEALLKVINQIDSPYIFIFPNNLETLNELKKNTILSQKDQKIIIAPSKNIAQTYS CCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH ALLAFDPSLDWDQNQEMIENTIKNIQIGEIIAADKMNEKLAINKEIDIAKESYLSIYEGE HHHHCCCCCCCCCCHHHHHHHHHCCCHHHEEECCCCCCCEEECCCCCHHHHHHHHHCCCE VVAAKPNKYEAINTLLKKMIKPCQSFLTIFYNSSVTNTHELAEIEKYLKKNYDHLELEIL EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEE ANEGVEAAYILSLE ECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]