| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is engA [H]
Identifier: 197294798
GI number: 197294798
Start: 802181
End: 803500
Strand: Reverse
Name: engA [H]
Synonym: PAa_0780
Alternate gene names: 197294798
Gene position: 803500-802181 (Counterclockwise)
Preceding gene: 197294799
Following gene: 197294797
Centisome position: 91.31
GC content: 30.76
Gene sequence:
>1320_bases ATGCCTAAAATAGCTATTGTGGGGCGACCCAACGTTGGTAAATCAAGTCTTTTTAATCGTCTTATCGGTAAAAGACAAGC AATCACGCACCACAAAGAAGGAATAACTCGCGATCGTATTTATGCTCAAGCTAATTGGTTAACCAGAACTTTTGATGTAA TTGACACTGGAGGGATTGAATTCCAAGCAATTCCTTTTTTAGAGCAAATTAAACAACAAGCTCAATTAGCTATTGATGAA GCTGATGTTATTATTTTTGTGGTCGATGGTAAAACCGGTTTAACTCAAAGTGATCATTATTTGGCCAAAATTTTATATCA AACTAAAAAAAAGGTTCTCTTAGTTGTTAATAAAATTGATAATCATGATTTATTATCTAATATTTATGAATTTTATGCTT TAGGTTTTGATGCCCCTTTGCCTGTCAGTGCTTTGCATGGAGTTGGAGTTGGAGACCTTTTGGACAAAATTATTTTTCAT TTAGATTTTTCTAAACCATCTTTACAAGCGACCGAAAATGAAACCGACAACGTTATTAAATTTTGCATCATTGGCCGCCC TAATGTTGGTAAATCAACTCTTACAAATTCTTTATTGTTTTCTCAAAGGATGGTAGTTTCTGACATCGCAGGCACTACTA CCGATGCTATTGACACTTTTTTTATCAATGAGGGACAAAAATACCAAATTATTGATACTGCAGGAATTAAAAAAAGAGGC AAAATATACGAACAAGAAGATAAATATAGTGTTTTAAGAGCTTTACAAACTTTGGCTAATTGCGATATTGCTTGTTTAGT AATCGATGCTCAAGCAGGCATTTTAGAACAAGATAAAAACATTGCAGGCCTCATTTTAGAACATCATAAGTCATATATTA TTATCGTTAATAAATGGGATTTAATTTCAAAAGAAACGAATACTATGAAAAAATTTGAAGATCAAATTCGCCAAGAATTT AAGTTTTTGCCAGATGCTCCTATTATTTTTTTATCAGCTTTCAAAAAAAACCGCCTTCAATCCCTTTTCCCTATTTTAAA AAAAGTTTTTCAAAATTATCAAAGTAATTTTAGCACTCATCTTTTGAATGATATTTTGCAAGAAGCAACTATTATAACTC CTCCTACTTGTTTTAATCAAGGAATAGCTAAATTTCGATATATTTTTCAAATTAAGTCTAAATCACCAGAATTTCTTTGT TTCGTGAACGATCCTAAATATATTCATTTTTCTTATGAAAGGTTTTTAAAAAACCAATTTCGTCAAAAACTTTCTTTAGA AGGCACTCCACTTAAAATTGTTTTTCACAAAAAAAAATAA
Upstream 100 bases:
>100_bases TGCAAAGGTCTTCTGAAGCTTTATTGTTAGACACCACGAAATTATCAATCGATGAAGTGGTTATGCAAATACAAGACTTA ATTAACAAAAAAACCTCTCC
Downstream 100 bases:
>100_bases TCAAGGCTTCTTGTTAGGGGCCTTTTTTTTGAAAAGAAATTATGTTTTTGAATATAAAACCCTTTAATAAAAAAAGTTTT TAAATGTGGGTTATAATTAA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MPKIAIVGRPNVGKSSLFNRLIGKRQAITHHKEGITRDRIYAQANWLTRTFDVIDTGGIEFQAIPFLEQIKQQAQLAIDE ADVIIFVVDGKTGLTQSDHYLAKILYQTKKKVLLVVNKIDNHDLLSNIYEFYALGFDAPLPVSALHGVGVGDLLDKIIFH LDFSKPSLQATENETDNVIKFCIIGRPNVGKSTLTNSLLFSQRMVVSDIAGTTTDAIDTFFINEGQKYQIIDTAGIKKRG KIYEQEDKYSVLRALQTLANCDIACLVIDAQAGILEQDKNIAGLILEHHKSYIIIVNKWDLISKETNTMKKFEDQIRQEF KFLPDAPIIFLSAFKKNRLQSLFPILKKVFQNYQSNFSTHLLNDILQEATIITPPTCFNQGIAKFRYIFQIKSKSPEFLC FVNDPKYIHFSYERFLKNQFRQKLSLEGTPLKIVFHKKK
Sequences:
>Translated_439_residues MPKIAIVGRPNVGKSSLFNRLIGKRQAITHHKEGITRDRIYAQANWLTRTFDVIDTGGIEFQAIPFLEQIKQQAQLAIDE ADVIIFVVDGKTGLTQSDHYLAKILYQTKKKVLLVVNKIDNHDLLSNIYEFYALGFDAPLPVSALHGVGVGDLLDKIIFH LDFSKPSLQATENETDNVIKFCIIGRPNVGKSTLTNSLLFSQRMVVSDIAGTTTDAIDTFFINEGQKYQIIDTAGIKKRG KIYEQEDKYSVLRALQTLANCDIACLVIDAQAGILEQDKNIAGLILEHHKSYIIIVNKWDLISKETNTMKKFEDQIRQEF KFLPDAPIIFLSAFKKNRLQSLFPILKKVFQNYQSNFSTHLLNDILQEATIITPPTCFNQGIAKFRYIFQIKSKSPEFLC FVNDPKYIHFSYERFLKNQFRQKLSLEGTPLKIVFHKKK >Mature_438_residues PKIAIVGRPNVGKSSLFNRLIGKRQAITHHKEGITRDRIYAQANWLTRTFDVIDTGGIEFQAIPFLEQIKQQAQLAIDEA DVIIFVVDGKTGLTQSDHYLAKILYQTKKKVLLVVNKIDNHDLLSNIYEFYALGFDAPLPVSALHGVGVGDLLDKIIFHL DFSKPSLQATENETDNVIKFCIIGRPNVGKSTLTNSLLFSQRMVVSDIAGTTTDAIDTFFINEGQKYQIIDTAGIKKRGK IYEQEDKYSVLRALQTLANCDIACLVIDAQAGILEQDKNIAGLILEHHKSYIIIVNKWDLISKETNTMKKFEDQIRQEFK FLPDAPIIFLSAFKKNRLQSLFPILKKVFQNYQSNFSTHLLNDILQEATIITPPTCFNQGIAKFRYIFQIKSKSPEFLCF VNDPKYIHFSYERFLKNQFRQKLSLEGTPLKIVFHKKK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=466, Percent_Identity=35.4077253218884, Blast_Score=282, Evalue=2e-77, Organism=Escherichia coli, GI1788919, Length=165, Percent_Identity=35.1515151515151, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323665, Length=201, Percent_Identity=32.8358208955224, Blast_Score=81, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 50069; Mature: 49937
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKIAIVGRPNVGKSSLFNRLIGKRQAITHHKEGITRDRIYAQANWLTRTFDVIDTGGIE CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHEEEEHEEECCCCE FQAIPFLEQIKQQAQLAIDEADVIIFVVDGKTGLTQSDHYLAKILYQTKKKVLLVVNKID EEECHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECC NHDLLSNIYEFYALGFDAPLPVSALHGVGVGDLLDKIIFHLDFSKPSLQATENETDNVIK CHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEE FCIIGRPNVGKSTLTNSLLFSQRMVVSDIAGTTTDAIDTFFINEGQKYQIIDTAGIKKRG EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEECCCCCCCC KIYEQEDKYSVLRALQTLANCDIACLVIDAQAGILEQDKNIAGLILEHHKSYIIIVNKWD CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCHHHHEEECCCCEEEEEECCC LISKETNTMKKFEDQIRQEFKFLPDAPIIFLSAFKKNRLQSLFPILKKVFQNYQSNFSTH CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LLNDILQEATIITPPTCFNQGIAKFRYIFQIKSKSPEFLCFVNDPKYIHFSYERFLKNQF HHHHHHHHCEECCCCHHHHHHHHHEEEEEEEECCCCCEEEEECCCCEEEEHHHHHHHHHH RQKLSLEGTPLKIVFHKKK HHHHCCCCCCEEEEEECCC >Mature Secondary Structure PKIAIVGRPNVGKSSLFNRLIGKRQAITHHKEGITRDRIYAQANWLTRTFDVIDTGGIE CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHEEEEHEEECCCCE FQAIPFLEQIKQQAQLAIDEADVIIFVVDGKTGLTQSDHYLAKILYQTKKKVLLVVNKID EEECHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECC NHDLLSNIYEFYALGFDAPLPVSALHGVGVGDLLDKIIFHLDFSKPSLQATENETDNVIK CHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEE FCIIGRPNVGKSTLTNSLLFSQRMVVSDIAGTTTDAIDTFFINEGQKYQIIDTAGIKKRG EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEECCCCCCCC KIYEQEDKYSVLRALQTLANCDIACLVIDAQAGILEQDKNIAGLILEHHKSYIIIVNKWD CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCHHHHEEECCCCEEEEEECCC LISKETNTMKKFEDQIRQEFKFLPDAPIIFLSAFKKNRLQSLFPILKKVFQNYQSNFSTH CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LLNDILQEATIITPPTCFNQGIAKFRYIFQIKSKSPEFLCFVNDPKYIHFSYERFLKNQF HHHHHHHHCEECCCCHHHHHHHHHEEEEEEEECCCCCEEEEECCCCEEEEHHHHHHHHHH RQKLSLEGTPLKIVFHKKK HHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA