| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is nadE [H]
Identifier: 197294783
GI number: 197294783
Start: 777905
End: 779671
Strand: Direct
Name: nadE [H]
Synonym: PAa_0763
Alternate gene names: 197294783
Gene position: 777905-779671 (Clockwise)
Preceding gene: 197294782
Following gene: 197294784
Centisome position: 88.4
GC content: 28.69
Gene sequence:
>1767_bases ATGTATAAAAACGGTTTAATTAAAATTCAATTATCCACTCCTAATTTAAAAATAGGAAATCCACAAGCAAATGCTTTCAG TATAAATAAAATTCTTCAAGAAAGCAAAGCTCTTTTTATTCTTTTTCCTGAACTTTGTTTAAGTGGTTATACTGCTGGTG ACCTTTTTTTTGAAACTTTCTTTTTAAAAGAAAATCTAAAGGCACTTGATTGGCTTTTAAAAAATAATACTTTTGAAGGG GTTTTTATTTTAGGAATGCCTTTAGCTTTGCATGAAGTTTTATTTAATGTTGCAGTTGTTATCCAAAAAGATAAAATTTT GGGTATAATACCTAAAAAAACCATCCCTAATTATAAAGAATTTATGGAAAAAAGATGGTTTCAATCAGGTAAAACCGTAG ACAATCAACAAATCACTATTTTAGGTCAAGAAGTTCCTTTTGGCGATATTTTATTTGTAAATTCCAAACATGATATTATT TTTGGGGTTGAAGTTTGTCAAGATTTATGGACTGTTTTTTCCCCTAGTGATTTAATGGCTTTAAATGGCGCTCATTTAAT TTTTAATCTTTCTTCATCAACAGAACATGTGGGCAAAATCAATCCTCGCAAAATCGCTATTTTAGACCATTCACGCAAAC AAATAGGCGGTTATTTTTATGCTAGTAGCGGAATTACTGAAATCACAGAATCAAACTTATTTTCCAACCATAAAATGGCA GCTTCATTAGGACAAATGATTGGAGAAAAAAACTTATTTAATCAAGATATTAATTTAATCGTTGATCTAGACCTTGATTT TATTAAATATCAAAGAAGGATTGACACTACTTACGGCGATCAAAGAATTGGCAACACCTTTCCTTTTTTAAAAGCTTTTT TTCAAACAGAAGAAAGCAGTGATTATCATTTTGAATCCCCTATTAGTCAAACTCCTTTTATTAACCAAGATAGTTTACAA AATGACTTGGAATTAGCCAATGAAATCCAAAAATTAGCTTTAAAAACGAAATTACAAGATTTAGATACCAAAGTTATTTT AGAAATAACCGAAAACATAAATGATTTTGTTACCTTCATGGTTCTTTTACAAACTTTTTCCCTTTTGCAAAAACCACTTG CAGATTTAATTATTATTCTAAATCCCATCTCTTTTCAAGATTTAAGTCATTACCAACTTTTAAAAACTTTTATCCAAGAA CAAGGGGTTGTTAACTTTCAAGAAAAAGGCTTTTCTAATCAAACCCAATTTTTATCTTTTTTATCTCACAATCAACTTTT AAAAGAAACAGATTCCCAAACAGCCTTGCTTTTAGAAAATAATAATTTTTCTGAGCTCGCTTTAGGTCAAATGAGTCAAA GAGGCTATTATGATTATCTTTATAATGTTAATTCAGGGCTACCTCATCTTTTAATCAAAGAATTAATTTTTTATCACTTA AAAAGCCCTCTTTTAAATCATTTCCAACCTTTAAAATTAATTTATCAACAAAAAGCACAAGCTTTAATGAATACTCAAAT TATTATTGAAGATTTTATTCTTTTTCACCATCTTAAAAATGGTCATGAGCCTAACAAAATCGCTTGGTTATTGCAAATTG TTTTTAATTATGATTCATTGCAAAGCCAAACTCTTGTTTTTAACTATTTAAAACGTTTTTTTCAAAGTCAATTTAAAAGA CAAAATATGTCTCCCGGTCCTAAAATTTTAGAAAATAGTCTTTGTCCTAGAGGCGAATCGCGTTTGCCAGTTGGTTTAAA AAGGTAA
Upstream 100 bases:
>100_bases TTAATTTAGTTTCAAGTAAATATATTTTATGTTATAATCAAAAATTAATCTTAATGTTTTGCAACAAAGATAAAACAAAT ATCAAGAAAGTAGGCAACAA
Downstream 100 bases:
>100_bases TTGGGCATTCTAATAATTAAAATTTTATTTGTATTTTCAAGTAAAAACAATTACTAACTGATTTAAAAAAAGTTTTTCTT GAAACCAAGAAATTAGTTAT
Product: NAD(+) synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MYKNGLIKIQLSTPNLKIGNPQANAFSINKILQESKALFILFPELCLSGYTAGDLFFETFFLKENLKALDWLLKNNTFEG VFILGMPLALHEVLFNVAVVIQKDKILGIIPKKTIPNYKEFMEKRWFQSGKTVDNQQITILGQEVPFGDILFVNSKHDII FGVEVCQDLWTVFSPSDLMALNGAHLIFNLSSSTEHVGKINPRKIAILDHSRKQIGGYFYASSGITEITESNLFSNHKMA ASLGQMIGEKNLFNQDINLIVDLDLDFIKYQRRIDTTYGDQRIGNTFPFLKAFFQTEESSDYHFESPISQTPFINQDSLQ NDLELANEIQKLALKTKLQDLDTKVILEITENINDFVTFMVLLQTFSLLQKPLADLIIILNPISFQDLSHYQLLKTFIQE QGVVNFQEKGFSNQTQFLSFLSHNQLLKETDSQTALLLENNNFSELALGQMSQRGYYDYLYNVNSGLPHLLIKELIFYHL KSPLLNHFQPLKLIYQQKAQALMNTQIIIEDFILFHHLKNGHEPNKIAWLLQIVFNYDSLQSQTLVFNYLKRFFQSQFKR QNMSPGPKILENSLCPRGESRLPVGLKR
Sequences:
>Translated_588_residues MYKNGLIKIQLSTPNLKIGNPQANAFSINKILQESKALFILFPELCLSGYTAGDLFFETFFLKENLKALDWLLKNNTFEG VFILGMPLALHEVLFNVAVVIQKDKILGIIPKKTIPNYKEFMEKRWFQSGKTVDNQQITILGQEVPFGDILFVNSKHDII FGVEVCQDLWTVFSPSDLMALNGAHLIFNLSSSTEHVGKINPRKIAILDHSRKQIGGYFYASSGITEITESNLFSNHKMA ASLGQMIGEKNLFNQDINLIVDLDLDFIKYQRRIDTTYGDQRIGNTFPFLKAFFQTEESSDYHFESPISQTPFINQDSLQ NDLELANEIQKLALKTKLQDLDTKVILEITENINDFVTFMVLLQTFSLLQKPLADLIIILNPISFQDLSHYQLLKTFIQE QGVVNFQEKGFSNQTQFLSFLSHNQLLKETDSQTALLLENNNFSELALGQMSQRGYYDYLYNVNSGLPHLLIKELIFYHL KSPLLNHFQPLKLIYQQKAQALMNTQIIIEDFILFHHLKNGHEPNKIAWLLQIVFNYDSLQSQTLVFNYLKRFFQSQFKR QNMSPGPKILENSLCPRGESRLPVGLKR >Mature_588_residues MYKNGLIKIQLSTPNLKIGNPQANAFSINKILQESKALFILFPELCLSGYTAGDLFFETFFLKENLKALDWLLKNNTFEG VFILGMPLALHEVLFNVAVVIQKDKILGIIPKKTIPNYKEFMEKRWFQSGKTVDNQQITILGQEVPFGDILFVNSKHDII FGVEVCQDLWTVFSPSDLMALNGAHLIFNLSSSTEHVGKINPRKIAILDHSRKQIGGYFYASSGITEITESNLFSNHKMA ASLGQMIGEKNLFNQDINLIVDLDLDFIKYQRRIDTTYGDQRIGNTFPFLKAFFQTEESSDYHFESPISQTPFINQDSLQ NDLELANEIQKLALKTKLQDLDTKVILEITENINDFVTFMVLLQTFSLLQKPLADLIIILNPISFQDLSHYQLLKTFIQE QGVVNFQEKGFSNQTQFLSFLSHNQLLKETDSQTALLLENNNFSELALGQMSQRGYYDYLYNVNSGLPHLLIKELIFYHL KSPLLNHFQPLKLIYQQKAQALMNTQIIIEDFILFHHLKNGHEPNKIAWLLQIVFNYDSLQSQTLVFNYLKRFFQSQFKR QNMSPGPKILENSLCPRGESRLPVGLKR
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=294, Percent_Identity=26.530612244898, Blast_Score=90, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17538756, Length=213, Percent_Identity=29.5774647887324, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321865, Length=266, Percent_Identity=27.8195488721804, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641841, Length=312, Percent_Identity=25.3205128205128, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24641843, Length=312, Percent_Identity=25.3205128205128, Blast_Score=79, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 67595; Mature: 67595
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKNGLIKIQLSTPNLKIGNPQANAFSINKILQESKALFILFPELCLSGYTAGDLFFETF CCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCEEEEEEHHHHHCCCCHHHHHHHHH FLKENLKALDWLLKNNTFEGVFILGMPLALHEVLFNVAVVIQKDKILGIIPKKTIPNYKE HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHEEECCCEEEECCCCCCCCHHH FMEKRWFQSGKTVDNQQITILGQEVPFGDILFVNSKHDIIFGVEVCQDLWTVFSPSDLMA HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEE LNGAHLIFNLSSSTEHVGKINPRKIAILDHSRKQIGGYFYASSGITEITESNLFSNHKMA ECCCEEEEEECCCCCHHCCCCCCEEEEEECCHHHHCCEEEECCCCHHHHHHHHHCCHHHH ASLGQMIGEKNLFNQDINLIVDLDLDFIKYQRRIDTTYGDQRIGNTFPFLKAFFQTEESS HHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC DYHFESPISQTPFINQDSLQNDLELANEIQKLALKTKLQDLDTKVILEITENINDFVTFM CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLLQTFSLLQKPLADLIIILNPISFQDLSHYQLLKTFIQEQGVVNFQEKGFSNQTQFLSF HHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCEEHHHCCCCCHHHHHHH LSHNQLLKETDSQTALLLENNNFSELALGQMSQRGYYDYLYNVNSGLPHLLIKELIFYHL HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH KSPLLNHFQPLKLIYQQKAQALMNTQIIIEDFILFHHLKNGHEPNKIAWLLQIVFNYDSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH QSQTLVFNYLKRFFQSQFKRQNMSPGPKILENSLCPRGESRLPVGLKR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MYKNGLIKIQLSTPNLKIGNPQANAFSINKILQESKALFILFPELCLSGYTAGDLFFETF CCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCEEEEEEHHHHHCCCCHHHHHHHHH FLKENLKALDWLLKNNTFEGVFILGMPLALHEVLFNVAVVIQKDKILGIIPKKTIPNYKE HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHEEECCCEEEECCCCCCCCHHH FMEKRWFQSGKTVDNQQITILGQEVPFGDILFVNSKHDIIFGVEVCQDLWTVFSPSDLMA HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEE LNGAHLIFNLSSSTEHVGKINPRKIAILDHSRKQIGGYFYASSGITEITESNLFSNHKMA ECCCEEEEEECCCCCHHCCCCCCEEEEEECCHHHHCCEEEECCCCHHHHHHHHHCCHHHH ASLGQMIGEKNLFNQDINLIVDLDLDFIKYQRRIDTTYGDQRIGNTFPFLKAFFQTEESS HHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC DYHFESPISQTPFINQDSLQNDLELANEIQKLALKTKLQDLDTKVILEITENINDFVTFM CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLLQTFSLLQKPLADLIIILNPISFQDLSHYQLLKTFIQEQGVVNFQEKGFSNQTQFLSF HHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCEEHHHCCCCCHHHHHHH LSHNQLLKETDSQTALLLENNNFSELALGQMSQRGYYDYLYNVNSGLPHLLIKELIFYHL HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH KSPLLNHFQPLKLIYQQKAQALMNTQIIIEDFILFHHLKNGHEPNKIAWLLQIVFNYDSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH QSQTLVFNYLKRFFQSQFKRQNMSPGPKILENSLCPRGESRLPVGLKR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]