| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294771
Identifier: 197294771
GI number: 197294771
Start: 759249
End: 760328
Strand: Direct
Name: 197294771
Synonym: PAa_0749
Alternate gene names: NA
Gene position: 759249-760328 (Clockwise)
Preceding gene: 197294769
Following gene: 197294772
Centisome position: 86.28
GC content: 28.52
Gene sequence:
>1080_bases ATGGAGTTATTTAAAGTATTAGTTATTATAGGTATTTTAGGAGTTTTTTTTGGATTGGGTCCTTTATTGATTTGGTTTGT TCAAAAACACGTAAATAATAAATTAAACAATGTAGAAAATATTAAATTAAAAATTGAAGTTGAGACAATAACTAAGCAAG AAAAATTAAAGCAAAAAATAGCTGAGTTAGTAAATAATAAAGCTTTATCAGTTCAAGAAAAAACTGAATTACAAGAAGAA ATAAATACTATTCAAACTGAATTAAACCAAAAACAAGCAGAATTATCACATAATCAAATGTTGATAGGACAATTAAAAGC TAAAAAATATACAAAAAGAAATCCAATAAAAGCTATAATTATATATTATATTATCATGCTTTGTATAATTGCTATTTTTG GTGGTTTTATATTTTTAGACAATAAATACGATATAACAAATTCAAAACCCAAAACTTATACTATTTCTGAACCGAAAGTA GAAATTGAATCTGAATGGTTTGAAGGATACCGTTCTATAGATGATAACTACCAAATTAAGAAATATTATAAAGCAGATGG TTATGACCCCAATGCAGAATTTGGGGCCACAAAAGATTGGAAAGGTAGTCCTTGTCAAAGTTATAGTCATGATGTTAATC ACCTTGTTTTGGGCCACCAAATGATTAAAGTAAAATACACTTTCTACGGCCTCAACGGCCTTGGTCGTGGAAAGCACCGT GAATACGAGCCAACTGATATAATGCCGTTTATGAAAAACCCTTTTGACAAATGGGAAGTAAAAGATAACAGGATTGATTT TTTTAATACTTTCCATACAAGAAATAAAGATGATGATTCACAATTTAATAATATGTTTATCAACGACCCTTCAAACTACT ACACAGAACTCAACTACGAAGGCCCAAAATGGTTAATTGAAGAAGATAAAGACTTCTTCATGGATGAAGTACAATGTCAT ATAATAAACCCCAAAGATTCTAGATATCCCAAAGATGAAATGAAAAATTACTACCTTCACTTCAACCCAAAACAAAGATA TATCACGCTTTACACTAAGAAATTTAATACAAAAAATTAA
Upstream 100 bases:
>100_bases AAACATGGTTTGGTCGGTAATGCAATTTTTTGCATTACCAGATTAGATTATGATACAATGATGATAAGTTATAAAAATAA AAAAGGAAGTTAATTATAGG
Downstream 100 bases:
>100_bases TAAATATTTTAAAACCAACTAAACAGTTTTTTTAACAATAAAGGCTTAAAAAAATAAAGTTATGTTAATAAAACAGAAAT GAGCTTAGGAATGGAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVETITKQEKLKQKIAELVNNKALSVQEKTELQEE INTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSIDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDNRIDFFNTFHTRNKDDDSQFNNMFINDPSNYYTELNYEGPKWLIEEDKDFFMDEVQCH IINPKDSRYPKDEMKNYYLHFNPKQRYITLYTKKFNTKN
Sequences:
>Translated_359_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVETITKQEKLKQKIAELVNNKALSVQEKTELQEE INTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSIDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDNRIDFFNTFHTRNKDDDSQFNNMFINDPSNYYTELNYEGPKWLIEEDKDFFMDEVQCH IINPKDSRYPKDEMKNYYLHFNPKQRYITLYTKKFNTKN >Mature_359_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVETITKQEKLKQKIAELVNNKALSVQEKTELQEE INTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSIDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDNRIDFFNTFHTRNKDDDSQFNNMFINDPSNYYTELNYEGPKWLIEEDKDFFMDEVQCH IINPKDSRYPKDEMKNYYLHFNPKQRYITLYTKKFNTKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42588; Mature: 42588
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVETITKQEKLKQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHH AELVNNKALSVQEKTELQEEINTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH IYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSIDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEEHHHHHHHHHCCCCCCEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDNRIDFFNTFHTRNKDDDSQFNNMFINDPSNYYTELNYE CCCCCCCCHHHCCCCCCCCCCCCCEEEEHHHCCCCCCCCHHHCCEEEECCCCCEEEECCC GPKWLIEEDKDFFMDEVQCHIINPKDSRYPKDEMKNYYLHFNPKQRYITLYTKKFNTKN CCCEEECCCHHHHHCCEEEEEECCCCCCCCHHHHCCEEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVETITKQEKLKQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHH AELVNNKALSVQEKTELQEEINTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH IYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSIDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEEHHHHHHHHHCCCCCCEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDNRIDFFNTFHTRNKDDDSQFNNMFINDPSNYYTELNYE CCCCCCCCHHHCCCCCCCCCCCCCEEEEHHHCCCCCCCCHHHCCEEEECCCCCEEEECCC GPKWLIEEDKDFFMDEVQCHIINPKDSRYPKDEMKNYYLHFNPKQRYITLYTKKFNTKN CCCEEECCCHHHHHCCEEEEEECCCCCCCCHHHHCCEEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA