Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is 197294750

Identifier: 197294750

GI number: 197294750

Start: 732909

End: 733289

Strand: Direct

Name: 197294750

Synonym: PAa_0716

Alternate gene names: NA

Gene position: 732909-733289 (Clockwise)

Preceding gene: 197294743

Following gene: 197294755

Centisome position: 83.29

GC content: 22.05

Gene sequence:

>381_bases
TTGATTTTACAAAAGAAAAAATTTAAAAAAATAATAGCTAGTAAAAATAATGTTGGTTATAAAATAGTTTTTCCTAATGA
TTTAGCTGTTTATCCTCAAAATTTAGACAGAGGAACTATTTGTTTTAATCTTTCAAATAAAAAAGTTCTTATTTCTCCTT
CTTACAAAATATATAAAATAAATACTGATAAGATATCTTGTCTTTATTTGCATTATTTAGTAAGAAACGACAATTCTATT
TTAATTTATGATTCTATTATTAATAAAGGCAATTCATGTGGTCGCGTATGTTCTGATATGAAATCTTTTTTAAATTTAGA
ATTTTTCTTTCCTTCCTTAAAAGAACAAAACAAAATCGCTTTTTTTGTCTTTGTTAGATGA

Upstream 100 bases:

>100_bases
CCAAAATCGGCGGTAGGCATGGGGAGATGATGTTTTTTTAGTTATTTTTAAATACTGAGCTTACGAAATAATTTAAAAAC
ACATTAACAAAGGACAAGGA

Downstream 100 bases:

>100_bases
AAGAATTAAAATAATACAAAACTTATTAGAAAAACATCAACAAGAATATCAATTATATTTCAATAAGATGTTTTATTTTA
AATAAAAATTAATAAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MILQKKKFKKIIASKNNVGYKIVFPNDLAVYPQNLDRGTICFNLSNKKVLISPSYKIYKINTDKISCLYLHYLVRNDNSI
LIYDSIINKGNSCGRVCSDMKSFLNLEFFFPSLKEQNKIAFFVFVR

Sequences:

>Translated_126_residues
MILQKKKFKKIIASKNNVGYKIVFPNDLAVYPQNLDRGTICFNLSNKKVLISPSYKIYKINTDKISCLYLHYLVRNDNSI
LIYDSIINKGNSCGRVCSDMKSFLNLEFFFPSLKEQNKIAFFVFVR
>Mature_126_residues
MILQKKKFKKIIASKNNVGYKIVFPNDLAVYPQNLDRGTICFNLSNKKVLISPSYKIYKINTDKISCLYLHYLVRNDNSI
LIYDSIINKGNSCGRVCSDMKSFLNLEFFFPSLKEQNKIAFFVFVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14661; Mature: 14661

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQKKKFKKIIASKNNVGYKIVFPNDLAVYPQNLDRGTICFNLSNKKVLISPSYKIYKI
CCCCHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCEEEECCCEEEEEE
NTDKISCLYLHYLVRNDNSILIYDSIINKGNSCGRVCSDMKSFLNLEFFFPSLKEQNKIA
ECCCEEEEEEEEEEECCCEEEEEEHHCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEE
FFVFVR
EEEEEC
>Mature Secondary Structure
MILQKKKFKKIIASKNNVGYKIVFPNDLAVYPQNLDRGTICFNLSNKKVLISPSYKIYKI
CCCCHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCEEEECCCEEEEEE
NTDKISCLYLHYLVRNDNSILIYDSIINKGNSCGRVCSDMKSFLNLEFFFPSLKEQNKIA
ECCCEEEEEEEEEEECCCEEEEEEHHCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEE
FFVFVR
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA