| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is hit [H]
Identifier: 197294739
GI number: 197294739
Start: 724109
End: 724522
Strand: Reverse
Name: hit [H]
Synonym: PAa_0705
Alternate gene names: 197294739
Gene position: 724522-724109 (Counterclockwise)
Preceding gene: 197294741
Following gene: 197294737
Centisome position: 82.34
GC content: 25.36
Gene sequence:
>414_bases ATGTCAACTGTTTTTACTAAAATCATTCAAAAAGAAATCCCAAGTTATCCTTTATATGAAGATAATTTATTAATTGCCTT TTTAGATATTACGCAAGCAACAAAAGGACACACTTTAGTTGTGACTAAAAAAGAATATCGCAACATTGAAGAAGTCCCTG AAGAAGTTTTTATTCATCTATTTAAAATAGTTCATAAAATAAGCAAAGCATTAATTAAAACATTTCAATTACAAGGGATT AATTTATTAAATAATAATGGTAGTGTTGCAGGACAAACAGTTTTTCATTATCATGTTCACTTGCTTCCTCGGTTTTGCAA AAAAGAAATTGGAGTTATGTTAAAAAATAACGCTAATAATTTAAAAATTTCAGATTATAAAAAGGTTCAACAAGCTATTT TAATGAATTTATAA
Upstream 100 bases:
>100_bases TTATTGTTAATCAATTATTAAATAAAATTACCAGTTTTTTTGATAAGTTAACGATTTCAAATATAAAACTAAATGGTAAT AGACATGAAAGGAATTTATT
Downstream 100 bases:
>100_bases AAATTATCATTTTCACATTTTTTATTTTTTAAGAAATTAAAAAAAAATGCAGACTTATTTTTAACCTTTGTCAAAATAGT GATTATATTTTTGTTCTTTT
Product: Diadenosine tetraphosphate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSTVFTKIIQKEIPSYPLYEDNLLIAFLDITQATKGHTLVVTKKEYRNIEEVPEEVFIHLFKIVHKISKALIKTFQLQGI NLLNNNGSVAGQTVFHYHVHLLPRFCKKEIGVMLKNNANNLKISDYKKVQQAILMNL
Sequences:
>Translated_137_residues MSTVFTKIIQKEIPSYPLYEDNLLIAFLDITQATKGHTLVVTKKEYRNIEEVPEEVFIHLFKIVHKISKALIKTFQLQGI NLLNNNGSVAGQTVFHYHVHLLPRFCKKEIGVMLKNNANNLKISDYKKVQQAILMNL >Mature_136_residues STVFTKIIQKEIPSYPLYEDNLLIAFLDITQATKGHTLVVTKKEYRNIEEVPEEVFIHLFKIVHKISKALIKTFQLQGIN LLNNNGSVAGQTVFHYHVHLLPRFCKKEIGVMLKNNANNLKISDYKKVQQAILMNL
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=104, Percent_Identity=36.5384615384615, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320078, Length=136, Percent_Identity=32.3529411764706, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 15779; Mature: 15648
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVFTKIIQKEIPSYPLYEDNLLIAFLDITQATKGHTLVVTKKEYRNIEEVPEEVFIHL CHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEECHHHCCHHHHHHHHHHHH FKIVHKISKALIKTFQLQGINLLNNNGSVAGQTVFHYHVHLLPRFCKKEIGVMLKNNANN HHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCC LKISDYKKVQQAILMNL CEEHHHHHHHHHHHHCC >Mature Secondary Structure STVFTKIIQKEIPSYPLYEDNLLIAFLDITQATKGHTLVVTKKEYRNIEEVPEEVFIHL HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEECHHHCCHHHHHHHHHHHH FKIVHKISKALIKTFQLQGINLLNNNGSVAGQTVFHYHVHLLPRFCKKEIGVMLKNNANN HHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCC LKISDYKKVQQAILMNL CEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]