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The map label for this gene is yhdJ [C]

Identifier: 197294693

GI number: 197294693

Start: 653229

End: 653777

Strand: Direct

Name: yhdJ [C]

Synonym: PAa_0655

Alternate gene names: 197294693

Gene position: 653229-653777 (Clockwise)

Preceding gene: 197294692

Following gene: 197294720

Centisome position: 74.23

GC content: 32.24

Gene sequence:

>549_bases
ATGCCTTCTTGTAGTTTTTGGCAACATTCTTATGAATCCATTTTATGTCTTTGGAATAACGAAAAACCAAAAATTAATAT
CGACCAAATTAGAGAACCTTATACTTCCAATTTTTTGAAATATGATGGAAAAAAAAGAAATGGCACTTTAGGCCGTTTTG
GCAATTCCGAAACTTTATATCGCGTAAACGAAAAAGGAGCTCTTCCGCGTGATATCATCAAAGTCCCTGCTTTGGCGGGT
GGCGCAGGCTTTAAAGAACAGTTCTTTTTGTGTAAAACTTGTGATTGTAAAATTTTTAGATCCAAAGAACTAAAAAACCA
CCAATCCCCTCATCAAACTATTATTCATCCTACCCAAAAACCTCAAATGTTAACTAATAAATTAATTGATTCAGCGATTA
TGGAAAACCAAAAAGGCAATATTTTAATTCCTTTCGCTGGTTCAGATTCAGAATGTTTAGTTGCCAAAAAGAAAAACTTA
AATTATATCGGCATCGAAATAAACCCTGATTATGTAATGTTAATCAACGAAGCATTAAAAAAAATATAA

Upstream 100 bases:

>100_bases
TTTTATATGTATGGTTTTCCTGAAATTTTGGCTCGTGTAGCAGCGAAATTTCCTTATGATAAACAAAGAAATTTTGGCTT
GGCATTATACTAACAAAAAC

Downstream 100 bases:

>100_bases
ACTAAAATAAACTATAAAAAAAAGTTTAATCCACAAAAAACACTTTTCACCCTCAAAGGCATAAAATAACACATTTTCAA
AAAAATCTCTTTATTTTACC

Product: Putative methylase

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPSCSFWQHSYESILCLWNNEKPKINIDQIREPYTSNFLKYDGKKRNGTLGRFGNSETLYRVNEKGALPRDIIKVPALAG
GAGFKEQFFLCKTCDCKIFRSKELKNHQSPHQTIIHPTQKPQMLTNKLIDSAIMENQKGNILIPFAGSDSECLVAKKKNL
NYIGIEINPDYVMLINEALKKI

Sequences:

>Translated_182_residues
MPSCSFWQHSYESILCLWNNEKPKINIDQIREPYTSNFLKYDGKKRNGTLGRFGNSETLYRVNEKGALPRDIIKVPALAG
GAGFKEQFFLCKTCDCKIFRSKELKNHQSPHQTIIHPTQKPQMLTNKLIDSAIMENQKGNILIPFAGSDSECLVAKKKNL
NYIGIEINPDYVMLINEALKKI
>Mature_181_residues
PSCSFWQHSYESILCLWNNEKPKINIDQIREPYTSNFLKYDGKKRNGTLGRFGNSETLYRVNEKGALPRDIIKVPALAGG
AGFKEQFFLCKTCDCKIFRSKELKNHQSPHQTIIHPTQKPQMLTNKLIDSAIMENQKGNILIPFAGSDSECLVAKKKNLN
YIGIEINPDYVMLINEALKKI

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 20779; Mature: 20648

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS50157 ZINC_FINGER_C2H2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSCSFWQHSYESILCLWNNEKPKINIDQIREPYTSNFLKYDGKKRNGTLGRFGNSETLY
CCCCHHHHHCCCEEEEEECCCCCEEEHHHHCCCHHCCCEEECCCCCCCCCCCCCCCCEEE
RVNEKGALPRDIIKVPALAGGAGFKEQFFLCKTCDCKIFRSKELKNHQSPHQTIIHPTQK
EECCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECHHHHCCCCCCCEEECCCCC
PQMLTNKLIDSAIMENQKGNILIPFAGSDSECLVAKKKNLNYIGIEINPDYVMLINEALK
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEECCCEEEEEHHHHH
KI
CC
>Mature Secondary Structure 
PSCSFWQHSYESILCLWNNEKPKINIDQIREPYTSNFLKYDGKKRNGTLGRFGNSETLY
CCCHHHHHCCCEEEEEECCCCCEEEHHHHCCCHHCCCEEECCCCCCCCCCCCCCCCEEE
RVNEKGALPRDIIKVPALAGGAGFKEQFFLCKTCDCKIFRSKELKNHQSPHQTIIHPTQK
EECCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECHHHHCCCCCCCEEECCCCC
PQMLTNKLIDSAIMENQKGNILIPFAGSDSECLVAKKKNLNYIGIEINPDYVMLINEALK
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEECCCEEEEEHHHHH
KI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA