Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294685

Identifier: 197294685

GI number: 197294685

Start: 642832

End: 643500

Strand: Direct

Name: 197294685

Synonym: PAa_0643

Alternate gene names: NA

Gene position: 642832-643500 (Clockwise)

Preceding gene: 197294675

Following gene: 197294686

Centisome position: 73.05

GC content: 24.07

Gene sequence:

>669_bases
ATGAATTGGTTGTTTTTTAAAAAAAAGAAAAAGCGGTTAAAATTATTAACTAATTTTTATCACTCTTTGCAAGGAGATCC
TTTTTTAACGGAAGAAATTATTTTAGACGGAGATTTAGTCAAAATTGAATTTTATTATTTAGAACAAAGCAAATATTATA
ATGCTTTATTTCAATCAAGGCAATTTGCTGTTTGGACAGCTAATCAAGGGGTTTGCAGACTTTTAGTTGACAAAGATTAT
TATCAACATTTTGCAGCTTTATACCAAAAAAAAATAAATATTTTTTGGCTAGAATTCATGACAAAAGTTTATCAAAAAGA
AATTAGTCTAATAAACAGAATCAAAATTGCTTTTGGGTTGGTTTTTCTTCCTTGTTTATTAGTTGTTTTTTTAACCCTTT
CAGTTTTTCAAAACAAAAATCGCTGGTTTTTATGGATTCCTTTAATTATTTTATTAATTTTTATTTTCATGATTAATCAC
TGGATTAAAAATAAACAAAAACAATTAGCTTTTTTTCAAGACCAAGAATTAAAAAAAACATTAGAAAAAATTAAAAAAGA
TTTAGGGGAAACTTTTTTTGCAAACCTCATTGAACAACAAAAAAAATATAATCCTGAATATAAACCATTAGAAAATGAAG
CAGAAAAGGATGATAACTTAAAAAATTAA

Upstream 100 bases:

>100_bases
ATCAGTTGCAAAAATTTATGAAAGAAAGATGTTGGCGTTGACTATATCAAAATAAAAGATTTGATAAAAGAAAATGTCAA
GAGAAATTAAAATACCTTAT

Downstream 100 bases:

>100_bases
AAAGGGGAAGAGGTTAAAAATGGAATACGATAGTATTGTTGTTGGCGCAGGACACGCAGGAGTTGAAGCTGCTTTAATAT
TGGCTAAAAAACATCAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNWLFFKKKKKRLKLLTNFYHSLQGDPFLTEEIILDGDLVKIEFYYLEQSKYYNALFQSRQFAVWTANQGVCRLLVDKDY
YQHFAALYQKKINIFWLEFMTKVYQKEISLINRIKIAFGLVFLPCLLVVFLTLSVFQNKNRWFLWIPLIILLIFIFMINH
WIKNKQKQLAFFQDQELKKTLEKIKKDLGETFFANLIEQQKKYNPEYKPLENEAEKDDNLKN

Sequences:

>Translated_222_residues
MNWLFFKKKKKRLKLLTNFYHSLQGDPFLTEEIILDGDLVKIEFYYLEQSKYYNALFQSRQFAVWTANQGVCRLLVDKDY
YQHFAALYQKKINIFWLEFMTKVYQKEISLINRIKIAFGLVFLPCLLVVFLTLSVFQNKNRWFLWIPLIILLIFIFMINH
WIKNKQKQLAFFQDQELKKTLEKIKKDLGETFFANLIEQQKKYNPEYKPLENEAEKDDNLKN
>Mature_222_residues
MNWLFFKKKKKRLKLLTNFYHSLQGDPFLTEEIILDGDLVKIEFYYLEQSKYYNALFQSRQFAVWTANQGVCRLLVDKDY
YQHFAALYQKKINIFWLEFMTKVYQKEISLINRIKIAFGLVFLPCLLVVFLTLSVFQNKNRWFLWIPLIILLIFIFMINH
WIKNKQKQLAFFQDQELKKTLEKIKKDLGETFFANLIEQQKKYNPEYKPLENEAEKDDNLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26983; Mature: 26983

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLFFKKKKKRLKLLTNFYHSLQGDPFLTEEIILDGDLVKIEFYYLEQSKYYNALFQSR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCEEEEEEEEECHHHHHHHHHHCC
QFAVWTANQGVCRLLVDKDYYQHFAALYQKKINIFWLEFMTKVYQKEISLINRIKIAFGL
CEEEEECCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLPCLLVVFLTLSVFQNKNRWFLWIPLIILLIFIFMINHWIKNKQKQLAFFQDQELKKT
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LEKIKKDLGETFFANLIEQQKKYNPEYKPLENEAEKDDNLKN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNWLFFKKKKKRLKLLTNFYHSLQGDPFLTEEIILDGDLVKIEFYYLEQSKYYNALFQSR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCEEEEEEEEECHHHHHHHHHHCC
QFAVWTANQGVCRLLVDKDYYQHFAALYQKKINIFWLEFMTKVYQKEISLINRIKIAFGL
CEEEEECCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLPCLLVVFLTLSVFQNKNRWFLWIPLIILLIFIFMINHWIKNKQKQLAFFQDQELKKT
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LEKIKKDLGETFFANLIEQQKKYNPEYKPLENEAEKDDNLKN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA