| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294683
Identifier: 197294683
GI number: 197294683
Start: 640484
End: 640843
Strand: Reverse
Name: 197294683
Synonym: PAa_0641
Alternate gene names: NA
Gene position: 640843-640484 (Counterclockwise)
Preceding gene: 197294684
Following gene: 197294682
Centisome position: 72.83
GC content: 23.61
Gene sequence:
>360_bases ATGTTTTTAAGTTTTACATTGATCGCTCAATATAATAAAAAAATTATCATTAGTATTTTGATTTTTTCCATCATTATTTT TTTAGGTTTTTTCATCTTTATTAATTATCGGGATTTTTTTGAAAATGAAGCTCCTGATGATGTAATTTCTGAAACCACTT CATTAATTGAACCAACGCCTGCTGTTTCTGAAGAAAATAGCTCCCAATCTAAAATAGATATCGTTAAAGATAAAGTTTTA AATAAATTAGGTACTGTAGCTGATAAAATGATTAATTCACAAAAAGTAAATAAATATTTAAACGATATCCCTAATAAATT AACTTCTTTGGTAATAAAAGACAAAAAAACAAAAAAGTAA
Upstream 100 bases:
>100_bases ATTTTTATTTAGTATTTTACCTTTTTTTGTTTAAGTGATCCAAAATTTGCATTTAAATTTTTAATTGGTATTTTTATTTT TTTTAATTTTAAATTAAAGG
Downstream 100 bases:
>100_bases ATTTATGAAACTAATTTTTTTTATAAAATATCTTAATAATTATTTTTTCATATAAAAGCTAATCTCTTAAGGTTAGCTTT TCAGTTTTTTAAAAAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MFLSFTLIAQYNKKIIISILIFSIIIFLGFFIFINYRDFFENEAPDDVISETTSLIEPTPAVSEENSSQSKIDIVKDKVL NKLGTVADKMINSQKVNKYLNDIPNKLTSLVIKDKKTKK
Sequences:
>Translated_119_residues MFLSFTLIAQYNKKIIISILIFSIIIFLGFFIFINYRDFFENEAPDDVISETTSLIEPTPAVSEENSSQSKIDIVKDKVL NKLGTVADKMINSQKVNKYLNDIPNKLTSLVIKDKKTKK >Mature_119_residues MFLSFTLIAQYNKKIIISILIFSIIIFLGFFIFINYRDFFENEAPDDVISETTSLIEPTPAVSEENSSQSKIDIVKDKVL NKLGTVADKMINSQKVNKYLNDIPNKLTSLVIKDKKTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13595; Mature: 13595
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSFTLIAQYNKKIIISILIFSIIIFLGFFIFINYRDFFENEAPDDVISETTSLIEPTP CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC AVSEENSSQSKIDIVKDKVLNKLGTVADKMINSQKVNKYLNDIPNKLTSLVIKDKKTKK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFLSFTLIAQYNKKIIISILIFSIIIFLGFFIFINYRDFFENEAPDDVISETTSLIEPTP CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC AVSEENSSQSKIDIVKDKVLNKLGTVADKMINSQKVNKYLNDIPNKLTSLVIKDKKTKK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA