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The map label for this gene is yhdP [H]

Identifier: 197294655

GI number: 197294655

Start: 605967

End: 607280

Strand: Reverse

Name: yhdP [H]

Synonym: PAa_0611

Alternate gene names: 197294655

Gene position: 607280-605967 (Counterclockwise)

Preceding gene: 197294656

Following gene: 197294644

Centisome position: 69.01

GC content: 28.01

Gene sequence:

>1314_bases
TTGTTTTTTAAGATGGAGTATTCAATATTGTTATTTATTTTTTTGATTTTATTGAACGCTTTTTTTGCTGCTAGCGAGAT
ATCTTTTATTTCTACTCCTGAAAGTAAAATAGAATTAGATATCAAAAGAGGTTATAAAAAAGCTTCAAGAGTTAAAAAAA
TTAAAGAAAAGCCAACTACTTTTTTATCTGTTATTCAAATTATGATTCATATCATCACTTTTTTTCAGGGACATATTGTA
ACATCTAGGTTCTTATCTGGCAATAGCGATTTTAAATATCAAATATCAATAGAGGCGTTAATCATTGCTGCTTCTATTAT
CTTCGGTGAATTAATCCCTAAAAGATTAGCGATGTGCTCACCTTCTAAAACTGCTTATTTTTTTGCTACTCCGATTTTAT
TCATGGCCGCTCTTATTAAACCTTTGGTTTGGGCTTTGACTAAAATAAGTGATTTTTTTTTGATGATATTTGGAGTCAAT
ATAAGTAAAAATAGCGTTTCGGTTTCAGAAGATGAACTCCGTTTAATGCTAAACTCATCTTATCGCAAAGGGATAATCGA
TAAAAATGAAAATAATATGATTCAAAATATTTTTGATTTCGATCACACGTCTATTTCTGAAGTTATGCGACACCGCACTC
AAGTGGTTGCTATTAATGATGACATTACTAAAGAAGAAATAATAGATTTTATTAGAAATCAAAAATACACTCGTTTCCCT
GTTTATAAAACTAACATTGATAATATTATAGGGGTTGTTCATGTTAAAGATATTTTTAAATGTTTAATGTTTAATCCTTC
CAATGAACCCTTTGATATTAAAAATTTAATTAGAGAAACTTATTTTGTTCCCGATTCTAAAAATACTAGTGAGCTTTTTC
GCGAAATGCAATCTAGTAAAAATCATATAGCAGTAGTTATTGATGAACACGGAGGAACTGCAGGTATTATTACCTTTGAA
GACTTAATCGAAGAAATATTGGGCGAAATTTTTGATGAATATGACAAAGATGAAGAAATAATGATTAAAGAAATATCTCA
AGGGGAATATATTGCCAACGGTTTTTCTAACTTAGAAGAAATTGAAGAAATCATTAAAATTGAATTTGATGATGGGGATT
GTGATTACGATACTTTGAATGGTTTTTTAATTGGAAAACTCGGCAGATTACCTCAAAAAGATGAAAAAATTAAAATTAAT
TATAAAGGATATCAATTTGAAGTTTTGCAACTCAAAGATAAAGTTATTTCTAAAATTAAAATTCGCAAAAATATCTTATC
CATCGCTACAAATGAATTAAAAGCAAGTAATTAA

Upstream 100 bases:

>100_bases
GGTGTTAATTTAAAAAATATGGACGTTAGTGATAGTACAAGGATATTCAAGATAGAAAACAAAATATATAATCTAAAAGG
CAATCACATGCAGCAAAAGG

Downstream 100 bases:

>100_bases
ATTACTTGCTTTTTTTATTTTATTACGTTATATTGATTCATCAAATTATTAAAACTTATTCCTTGGATAAATTTGCTCAT
AATTTCATGTATCTTGTCAA

Product: Putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MFFKMEYSILLFIFLILLNAFFAASEISFISTPESKIELDIKRGYKKASRVKKIKEKPTTFLSVIQIMIHIITFFQGHIV
TSRFLSGNSDFKYQISIEALIIAASIIFGELIPKRLAMCSPSKTAYFFATPILFMAALIKPLVWALTKISDFFLMIFGVN
ISKNSVSVSEDELRLMLNSSYRKGIIDKNENNMIQNIFDFDHTSISEVMRHRTQVVAINDDITKEEIIDFIRNQKYTRFP
VYKTNIDNIIGVVHVKDIFKCLMFNPSNEPFDIKNLIRETYFVPDSKNTSELFREMQSSKNHIAVVIDEHGGTAGIITFE
DLIEEILGEIFDEYDKDEEIMIKEISQGEYIANGFSNLEEIEEIIKIEFDDGDCDYDTLNGFLIGKLGRLPQKDEKIKIN
YKGYQFEVLQLKDKVISKIKIRKNILSIATNELKASN

Sequences:

>Translated_437_residues
MFFKMEYSILLFIFLILLNAFFAASEISFISTPESKIELDIKRGYKKASRVKKIKEKPTTFLSVIQIMIHIITFFQGHIV
TSRFLSGNSDFKYQISIEALIIAASIIFGELIPKRLAMCSPSKTAYFFATPILFMAALIKPLVWALTKISDFFLMIFGVN
ISKNSVSVSEDELRLMLNSSYRKGIIDKNENNMIQNIFDFDHTSISEVMRHRTQVVAINDDITKEEIIDFIRNQKYTRFP
VYKTNIDNIIGVVHVKDIFKCLMFNPSNEPFDIKNLIRETYFVPDSKNTSELFREMQSSKNHIAVVIDEHGGTAGIITFE
DLIEEILGEIFDEYDKDEEIMIKEISQGEYIANGFSNLEEIEEIIKIEFDDGDCDYDTLNGFLIGKLGRLPQKDEKIKIN
YKGYQFEVLQLKDKVISKIKIRKNILSIATNELKASN
>Mature_437_residues
MFFKMEYSILLFIFLILLNAFFAASEISFISTPESKIELDIKRGYKKASRVKKIKEKPTTFLSVIQIMIHIITFFQGHIV
TSRFLSGNSDFKYQISIEALIIAASIIFGELIPKRLAMCSPSKTAYFFATPILFMAALIKPLVWALTKISDFFLMIFGVN
ISKNSVSVSEDELRLMLNSSYRKGIIDKNENNMIQNIFDFDHTSISEVMRHRTQVVAINDDITKEEIIDFIRNQKYTRFP
VYKTNIDNIIGVVHVKDIFKCLMFNPSNEPFDIKNLIRETYFVPDSKNTSELFREMQSSKNHIAVVIDEHGGTAGIITFE
DLIEEILGEIFDEYDKDEEIMIKEISQGEYIANGFSNLEEIEEIIKIEFDDGDCDYDTLNGFLIGKLGRLPQKDEKIKIN
YKGYQFEVLQLKDKVISKIKIRKNILSIATNELKASN

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=380, Percent_Identity=31.0526315789474, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI94681046, Length=250, Percent_Identity=29.2, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1790664, Length=433, Percent_Identity=24.4803695150115, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI145693175, Length=409, Percent_Identity=23.4718826405868, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1786879, Length=252, Percent_Identity=29.7619047619048, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI87082033, Length=248, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788119, Length=244, Percent_Identity=22.1311475409836, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6324512, Length=345, Percent_Identity=24.9275362318841, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 50346; Mature: 50346

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKMEYSILLFIFLILLNAFFAASEISFISTPESKIELDIKRGYKKASRVKKIKEKPTT
CEEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEHHHHHHHHHHHHHHHHHCCHH
FLSVIQIMIHIITFFQGHIVTSRFLSGNSDFKYQISIEALIIAASIIFGELIPKRLAMCS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
PSKTAYFFATPILFMAALIKPLVWALTKISDFFLMIFGVNISKNSVSVSEDELRLMLNSS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCC
YRKGIIDKNENNMIQNIFDFDHTSISEVMRHRTQVVAINDDITKEEIIDFIRNQKYTRFP
HHCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEECC
VYKTNIDNIIGVVHVKDIFKCLMFNPSNEPFDIKNLIRETYFVPDSKNTSELFREMQSSK
EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
NHIAVVIDEHGGTAGIITFEDLIEEILGEIFDEYDKDEEIMIKEISQGEYIANGFSNLEE
CEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCHHH
IEEIIKIEFDDGDCDYDTLNGFLIGKLGRLPQKDEKIKINYKGYQFEVLQLKDKVISKIK
HHHHHEEEECCCCCCHHHHCCEEEECCCCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHH
IRKNILSIATNELKASN
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFFKMEYSILLFIFLILLNAFFAASEISFISTPESKIELDIKRGYKKASRVKKIKEKPTT
CEEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEHHHHHHHHHHHHHHHHHCCHH
FLSVIQIMIHIITFFQGHIVTSRFLSGNSDFKYQISIEALIIAASIIFGELIPKRLAMCS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
PSKTAYFFATPILFMAALIKPLVWALTKISDFFLMIFGVNISKNSVSVSEDELRLMLNSS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCC
YRKGIIDKNENNMIQNIFDFDHTSISEVMRHRTQVVAINDDITKEEIIDFIRNQKYTRFP
HHCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEECC
VYKTNIDNIIGVVHVKDIFKCLMFNPSNEPFDIKNLIRETYFVPDSKNTSELFREMQSSK
EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
NHIAVVIDEHGGTAGIITFEDLIEEILGEIFDEYDKDEEIMIKEISQGEYIANGFSNLEE
CEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCHHH
IEEIIKIEFDDGDCDYDTLNGFLIGKLGRLPQKDEKIKINYKGYQFEVLQLKDKVISKIK
HHHHHEEEECCCCCCHHHHCCEEEECCCCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHH
IRKNILSIATNELKASN
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]