| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is pgk [H]
Identifier: 197294556
GI number: 197294556
Start: 504566
End: 505771
Strand: Reverse
Name: pgk [H]
Synonym: PAa_0511
Alternate gene names: 197294556
Gene position: 505771-504566 (Counterclockwise)
Preceding gene: 197294557
Following gene: 197294555
Centisome position: 57.48
GC content: 31.26
Gene sequence:
>1206_bases ATGAAGAATCAATTAACTAATTTAAAGATCGAAAATAAAAAAGTTTTATTGCGGGCTGATTTGAATGTGCCTTTAGAAAA CAATGTCATTACAGACGATAACCGAATTAAGGCTATTTTGCCAACTTTGCAATATTTAATCGAAAAAAAAGCCAAAATAA TTGTTTTATCTCACTTGGGAAGAATCAAAGAAGAATCCCAAAAAGCCCATTTTAGTTTAAAATCTGTAGCTGATAAATTA TCTTTTTATTTAAAACAAAAAGTTGTTTTCGTACCAGCAACAAAAGGTAGGCTTGTGGAAGATGCTATCAATAAATTAAT CCCTGGCGAAGTTATGATGCTTGAAAACACTCGTTTTGAAGATCTAGATAATAAAGCTGAAAGCAAAAATAATCCTCAGT TAGGTCAATATTGGGCTTCTTTGGGTGATGTTTTTGTTAATGATGCTTTTGGTACTTGTCATCGAACTCACGCCTCTAAT GTAGGGATTGCAAATAATATCAAAGAAAAATGTTTTGGTTTTTTGGTTGAAAAAGAAATCAATTTCATTCAAAAAATCAT TTCCAATCCACAAAGACCATTAATAGCAATTTTGGGTGGTTCCAAAGTATCTGATAAAATAGAGTTAATTAAAAATATGT TAAAAAAAGTGGATTTTCTTTTGATTGGCGGAGGAATGAGTTACACTTTTTTAAAAACTCAAGGATTTGAAGTTGGTACA AGTCTATTAGAGGCAGATAAAATACCATTAGTAAAAGATTTGTTATCTTCTCCTGAAGCTAAAAAAATCATTTTACCAAA AGATTTTGTTTGTGGAAAAGAATTTTCTCCAAATACTGAATCGGCAATTTATAAATGTTTTAATATTCCTAATAATTTTA TGGGAATGGACATTGGACCAGAAACTATCCAACTTTTTAAACATTATTTAACAAAGGCTAAAACAATTGTTTGGAATGGC CCTGTAGGTGTTTTCGAATTTGAAAAATTTAGCCATGGAACTAAAAGCATAGCTCAAATAATTAGCTCATTACTTTCTTC AACAACGACAATTATTGGCGGTGGTGATAGTGCTGCAGCGGTGTTTAAATTTGGTCTGGAAAAACATTTCAGTCATATTT CAACTGGTGGGGGAGCTTTTTTAGAATTTTTAGAAGGAAAACCCATGCCAGGACTTGCATGCATTCAAGACATCAAAGAA TCATAA
Upstream 100 bases:
>100_bases TTTTTAGCGATTAAAGAAGAAATTAAACGCAAATTAACTCTTTTTGGTTCCGTCAACAAAGCTTAAAATAAAAAAAATTA AAATAAAAGGTATAATTGTT
Downstream 100 bases:
>100_bases TTTTTTATCAAAAAAAATAATTAAATAAAAAAATAAAAAAAAGAGGTTTTAATAATTATGAAAGTTAGAGTAGCAATTAA TGGTTTTGGCCGCATCGGAA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKNQLTNLKIENKKVLLRADLNVPLENNVITDDNRIKAILPTLQYLIEKKAKIIVLSHLGRIKEESQKAHFSLKSVADKL SFYLKQKVVFVPATKGRLVEDAINKLIPGEVMMLENTRFEDLDNKAESKNNPQLGQYWASLGDVFVNDAFGTCHRTHASN VGIANNIKEKCFGFLVEKEINFIQKIISNPQRPLIAILGGSKVSDKIELIKNMLKKVDFLLIGGGMSYTFLKTQGFEVGT SLLEADKIPLVKDLLSSPEAKKIILPKDFVCGKEFSPNTESAIYKCFNIPNNFMGMDIGPETIQLFKHYLTKAKTIVWNG PVGVFEFEKFSHGTKSIAQIISSLLSSTTTIIGGGDSAAAVFKFGLEKHFSHISTGGGAFLEFLEGKPMPGLACIQDIKE S
Sequences:
>Translated_401_residues MKNQLTNLKIENKKVLLRADLNVPLENNVITDDNRIKAILPTLQYLIEKKAKIIVLSHLGRIKEESQKAHFSLKSVADKL SFYLKQKVVFVPATKGRLVEDAINKLIPGEVMMLENTRFEDLDNKAESKNNPQLGQYWASLGDVFVNDAFGTCHRTHASN VGIANNIKEKCFGFLVEKEINFIQKIISNPQRPLIAILGGSKVSDKIELIKNMLKKVDFLLIGGGMSYTFLKTQGFEVGT SLLEADKIPLVKDLLSSPEAKKIILPKDFVCGKEFSPNTESAIYKCFNIPNNFMGMDIGPETIQLFKHYLTKAKTIVWNG PVGVFEFEKFSHGTKSIAQIISSLLSSTTTIIGGGDSAAAVFKFGLEKHFSHISTGGGAFLEFLEGKPMPGLACIQDIKE S >Mature_401_residues MKNQLTNLKIENKKVLLRADLNVPLENNVITDDNRIKAILPTLQYLIEKKAKIIVLSHLGRIKEESQKAHFSLKSVADKL SFYLKQKVVFVPATKGRLVEDAINKLIPGEVMMLENTRFEDLDNKAESKNNPQLGQYWASLGDVFVNDAFGTCHRTHASN VGIANNIKEKCFGFLVEKEINFIQKIISNPQRPLIAILGGSKVSDKIELIKNMLKKVDFLLIGGGMSYTFLKTQGFEVGT SLLEADKIPLVKDLLSSPEAKKIILPKDFVCGKEFSPNTESAIYKCFNIPNNFMGMDIGPETIQLFKHYLTKAKTIVWNG PVGVFEFEKFSHGTKSIAQIISSLLSSTTTIIGGGDSAAAVFKFGLEKHFSHISTGGGAFLEFLEGKPMPGLACIQDIKE S
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=417, Percent_Identity=43.8848920863309, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI31543397, Length=411, Percent_Identity=41.6058394160584, Blast_Score=311, Evalue=9e-85, Organism=Escherichia coli, GI1789294, Length=396, Percent_Identity=41.1616161616162, Blast_Score=292, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17508823, Length=408, Percent_Identity=43.3823529411765, Blast_Score=331, Evalue=4e-91, Organism=Saccharomyces cerevisiae, GI6319857, Length=414, Percent_Identity=41.7874396135266, Blast_Score=312, Evalue=5e-86, Organism=Drosophila melanogaster, GI17136394, Length=415, Percent_Identity=41.4457831325301, Blast_Score=302, Evalue=3e-82, Organism=Drosophila melanogaster, GI24581203, Length=414, Percent_Identity=40.8212560386473, Blast_Score=292, Evalue=4e-79,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 44426; Mature: 44426
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNQLTNLKIENKKVLLRADLNVPLENNVITDDNRIKAILPTLQYLIEKKAKIIVLSHLG CCCCCCCEEECCCEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEHHHH RIKEESQKAHFSLKSVADKLSFYLKQKVVFVPATKGRLVEDAINKLIPGEVMMLENTRFE HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCH DLDNKAESKNNPQLGQYWASLGDVFVNDAFGTCHRTHASNVGIANNIKEKCFGFLVEKEI HCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NFIQKIISNPQRPLIAILGGSKVSDKIELIKNMLKKVDFLLIGGGMSYTFLKTQGFEVGT HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCHHHH SLLEADKIPLVKDLLSSPEAKKIILPKDFVCGKEFSPNTESAIYKCFNIPNNFMGMDIGP HHHHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH ETIQLFKHYLTKAKTIVWNGPVGVFEFEKFSHGTKSIAQIISSLLSSTTTIIGGGDSAAA HHHHHHHHHHHHCCEEEECCCCCCEEEHHHCCCHHHHHHHHHHHHHCCEEEEECCCCHHH VFKFGLEKHFSHISTGGGAFLEFLEGKPMPGLACIQDIKES HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKNQLTNLKIENKKVLLRADLNVPLENNVITDDNRIKAILPTLQYLIEKKAKIIVLSHLG CCCCCCCEEECCCEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEHHHH RIKEESQKAHFSLKSVADKLSFYLKQKVVFVPATKGRLVEDAINKLIPGEVMMLENTRFE HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCH DLDNKAESKNNPQLGQYWASLGDVFVNDAFGTCHRTHASNVGIANNIKEKCFGFLVEKEI HCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NFIQKIISNPQRPLIAILGGSKVSDKIELIKNMLKKVDFLLIGGGMSYTFLKTQGFEVGT HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCHHHH SLLEADKIPLVKDLLSSPEAKKIILPKDFVCGKEFSPNTESAIYKCFNIPNNFMGMDIGP HHHHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH ETIQLFKHYLTKAKTIVWNGPVGVFEFEKFSHGTKSIAQIISSLLSSTTTIIGGGDSAAA HHHHHHHHHHHHCCEEEECCCCCCEEEHHHCCCHHHHHHHHHHHHHCCEEEEECCCCHHH VFKFGLEKHFSHISTGGGAFLEFLEGKPMPGLACIQDIKES HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA