Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is smtA [H]

Identifier: 197294552

GI number: 197294552

Start: 499566

End: 500165

Strand: Reverse

Name: smtA [H]

Synonym: PAa_0507

Alternate gene names: 197294552

Gene position: 500165-499566 (Counterclockwise)

Preceding gene: 197294553

Following gene: 197294551

Centisome position: 56.84

GC content: 23.17

Gene sequence:

>600_bases
ATGATGTTTCATAAAGAAAAATATTTGCAAAAATTAAAAAAATACGCCCAAGAAAACAATATCCCTATAATCAAAAATAA
AAGCCTAGATTTTTTACTCCAAATAATTAACCAATTTAAAATACAAAATATTTTAGAAATAGGAACCGCTATTGGTTATA
GCACTTTGTCGATGAGTTTTGAAAACACTCAAATAGATACTTTGGAAAGAGATTATCTGAATTATCATTTAGCTAAAAAC
TTTCTTCAAAAAACTCCTTTTAAAATCAATGTCATTTGGACAGAAGCCTTAATTTATCCAATCAATAAATTAAAAAAATA
TGATTTGATTTTTATTGATGCTGCAAAAGCTCAATATAAAAAAATATTTGTTAAATTTTGTTCTTTACTTAATCCTCAAG
GGATAATTATTTGTGATAATTTGCATTTAAGTTGTTTTCGAAATGAAAAAAACACTGCAAAACAAAAAGGTATTTTCAAA
AAAATGCAGGATTTCGAAATATTTTTGCAAAACCATCCAGATTTTCAAACTGTTTTTAAAAATATTGATGATGGTTTAAG
TATTTCTTATAAAATAACAGATAAAATAAAAATAAATTAA

Upstream 100 bases:

>100_bases
TTAAGACAAAATAACAAAAAGAAAAAGAAAATAAAAACACTTAAAGATGTCATTGCAGCTACTATTATTTTACAAAATTA
TCTAGATTTTAAAGAGATCA

Downstream 100 bases:

>100_bases
AAGAAAAGGTTTTTTATGAAAAATAAAATTTATGAACTAACCCAACCAGGAATTTTAAAATTAAAAAAAGAATTGACTTT
TTTAAAAGAAGTTAAAAGAA

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSFENTQIDTLERDYLNYHLAKN
FLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYKKIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFK
KMQDFEIFLQNHPDFQTVFKNIDDGLSISYKITDKIKIN

Sequences:

>Translated_199_residues
MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSFENTQIDTLERDYLNYHLAKN
FLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYKKIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFK
KMQDFEIFLQNHPDFQTVFKNIDDGLSISYKITDKIKIN
>Mature_199_residues
MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSFENTQIDTLERDYLNYHLAKN
FLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYKKIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFK
KMQDFEIFLQNHPDFQTVFKNIDDGLSISYKITDKIKIN

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 23503; Mature: 23503

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSF
CCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEE
ENTQIDTLERDYLNYHLAKNFLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYK
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEEEECCHHHHH
KIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFKKMQDFEIFLQNHPDFQTVFK
HHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NIDDGLSISYKITDKIKIN
CCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSF
CCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEE
ENTQIDTLERDYLNYHLAKNFLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYK
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEEEECCHHHHH
KIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFKKMQDFEIFLQNHPDFQTVFK
HHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NIDDGLSISYKITDKIKIN
CCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]