| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is nfnB [H]
Identifier: 197294545
GI number: 197294545
Start: 496167
End: 496784
Strand: Direct
Name: nfnB [H]
Synonym: PAa_0500
Alternate gene names: 197294545
Gene position: 496167-496784 (Clockwise)
Preceding gene: 197294544
Following gene: 197294568
Centisome position: 56.39
GC content: 26.54
Gene sequence:
>618_bases ATGAATAATATCTTAACATCGAGAAAAGCTGTTAAAGTTTTTAAAAAAAATCATATTATTCCCCAAAATATTTTGGATCA AATTTTGACAGATACAATGAAAGCCCCTTCAACTTTTAATTTGCAACCTTGGCATTTTTTTGTGATAAATAGTGTATCAA GCAAAGACAAATTAAAGTCATGTTTATATGGCAATAAGAGCCAATTAGAAACAAGTTCAGCCATCATTTTAGTTTCTGGT AATATACAGAAAAACGATACAAAAGAAGAAATTTTAAGAGAGTCTTTTGCTTTTCATAAAACACCTAAATTAATTCAACA ACAATTATTATCTAAAATTGATCTTTTATATCAAAAAAAACCTTACGAAGAAATCAAAAATGAAATTTTTTTAGAATGTG GTCTTGTTTCTTTGCAATTAATGTTAGTTGCAAAAACTTATGGCTATGATACTTGCCCTATAGGTGGTTTTAATGATAAA ATTATTAACCAAATTTTTAACATCGATAAAAAATTTATCCCCATTTTGTTGATAGCTTTGGGGAAGTCATCAGAAGAAAC ACTTTTGCAATCGCCTTCTTTTAGATTATCTTTTGATAAAGTAACAACTTATTTATAA
Upstream 100 bases:
>100_bases TGTTAAATGGCAAGAAGCGAGACAAAATAAAGATTTTAAACAAGCAGATTTTTTAAGAAAAGAATTAATTGATAAAAATT TATTATAGAAAGAGCTTTTT
Downstream 100 bases:
>100_bases TAAAAAAACCAAGCAAAAAAGCTTGGTTTTTTTATTATTCAAAAGATAAATATTTTTTTCTTAAAATATTATTTTTAGTA ATAATTTTTCTTACTAAAGG
Product: Putative nitroreductase
Products: NAD(P)(+); @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNNILTSRKAVKVFKKNHIIPQNILDQILTDTMKAPSTFNLQPWHFFVINSVSSKDKLKSCLYGNKSQLETSSAIILVSG NIQKNDTKEEILRESFAFHKTPKLIQQQLLSKIDLLYQKKPYEEIKNEIFLECGLVSLQLMLVAKTYGYDTCPIGGFNDK IINQIFNIDKKFIPILLIALGKSSEETLLQSPSFRLSFDKVTTYL
Sequences:
>Translated_205_residues MNNILTSRKAVKVFKKNHIIPQNILDQILTDTMKAPSTFNLQPWHFFVINSVSSKDKLKSCLYGNKSQLETSSAIILVSG NIQKNDTKEEILRESFAFHKTPKLIQQQLLSKIDLLYQKKPYEEIKNEIFLECGLVSLQLMLVAKTYGYDTCPIGGFNDK IINQIFNIDKKFIPILLIALGKSSEETLLQSPSFRLSFDKVTTYL >Mature_205_residues MNNILTSRKAVKVFKKNHIIPQNILDQILTDTMKAPSTFNLQPWHFFVINSVSSKDKLKSCLYGNKSQLETSSAIILVSG NIQKNDTKEEILRESFAFHKTPKLIQQQLLSKIDLLYQKKPYEEIKNEIFLECGLVSLQLMLVAKTYGYDTCPIGGFNDK IINQIFNIDKKFIPILLIALGKSSEETLLQSPSFRLSFDKVTTYL
Specific function: Reduction Of A Variety Of Nitroaromatic Compounds Using NADH (And To Lesser Extent Nadph) As Source Of Reducing Equivalents; Two Electrons Are Transferred. Capable Of Reducing Nitrofurazone, Quinones And The Anti-Tumor Agent Cb1954 (5- (Aziridin-1-Yl)-2,4
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 23437; Mature: 23437
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNILTSRKAVKVFKKNHIIPQNILDQILTDTMKAPSTFNLQPWHFFVINSVSSKDKLKS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHH CLYGNKSQLETSSAIILVSGNIQKNDTKEEILRESFAFHKTPKLIQQQLLSKIDLLYQKK HHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC PYEEIKNEIFLECGLVSLQLMLVAKTYGYDTCPIGGFNDKIINQIFNIDKKFIPILLIAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH GKSSEETLLQSPSFRLSFDKVTTYL CCCCHHHHHCCCCCEEEHHHHHHCC >Mature Secondary Structure MNNILTSRKAVKVFKKNHIIPQNILDQILTDTMKAPSTFNLQPWHFFVINSVSSKDKLKS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHH CLYGNKSQLETSSAIILVSGNIQKNDTKEEILRESFAFHKTPKLIQQQLLSKIDLLYQKK HHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC PYEEIKNEIFLECGLVSLQLMLVAKTYGYDTCPIGGFNDKIINQIFNIDKKFIPILLIAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH GKSSEETLLQSPSFRLSFDKVTTYL CCCCHHHHHCCCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H; 6,7-Dihydropteridine [C]
Specific reaction: NAD(P)H + 6,7-Dihydropteridine = NAD(P)(+) + @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]