| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is metl [C]
Identifier: 197294537
GI number: 197294537
Start: 490226
End: 490939
Strand: Direct
Name: metl [C]
Synonym: PAa_0492
Alternate gene names: 197294537
Gene position: 490226-490939 (Clockwise)
Preceding gene: 197294536
Following gene: 197294538
Centisome position: 55.71
GC content: 26.89
Gene sequence:
>714_bases ATGATGTTTTTAAAAACTTTGTGGAATGTCATTGTTTATAATGAATTTGGTAAATATTTGTTTATAAATGCTTTTTTAGA AACCATTAAAATGGCTTTTCTTTCTTCTTTGATTGCTTTTTTCTTTGGACTTTTTTTGGGCGTTTATTTATATTTATTAA AAATAAAAAACCATCATAAAAGATATTGGATTTGCAATACTTTAATGAATTTTTTAATTGCAACCCCTTTTTTATTGTTG ATTTTTTTATTTATTAAATTTATTTTGTACCCTTTTTTTCATTTGTCTTATGGTTTTTGGGTTGGTTTTATTTCTTTGTT GTTAATTTTGACACCTCTTTTTGCTCGCCATTGTGAACAAGTTTTTCTTACTGTTAACCCTGAAATTTATCAGACATCTT ATAGCCTTGGAGCCAATGATTGGCAATTTGTTAAATGTTTTTTATTAAAAGAGGCTCGTTCTGATCTTATTTTAAGAGCT GTTTCACTTTTTTCTACTTCTTTGGCTTATTCTTCTGTTTTAGGAATTGTAGGACATGAAGGAATTGGTGAAATTGCTAT TTCTCGTGGTTATAATGGTGATTCTTATTTGTTAGAATCGCACGGATTCAATTCTTTAAATTTAATTATTGTTTGTGCTC TTGTGATGTTTCTTTTAACTCAAATAGTTCAGTTAATCGGCAGTTTTGTAGCTAATAAATTAAATAAAAGGTAA
Upstream 100 bases:
>100_bases GAAAACTACTATATGATTCCAAAAAAAGATATAGACCCTCTTAGTGTAATAATTAAAAATAACTATTTGGGAAAAACATT TTCTCAAGAGACTTTGTAAG
Downstream 100 bases:
>100_bases TCATTAAATTTTTAAATTTAGTATTTTTTTCTTTCAAAATTAAAAAAATAAGGTATAATATTTTTGTGGATCATATGAAA TTAATTATAGCTATTGTTTC
Product: D-methionine transport system permease protein
Products: NA
Alternate protein names: D-Methionine Transport System Permease Protein; D-Methionine ABC Transporter Permease Component
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MMFLKTLWNVIVYNEFGKYLFINAFLETIKMAFLSSLIAFFFGLFLGVYLYLLKIKNHHKRYWICNTLMNFLIATPFLLL IFLFIKFILYPFFHLSYGFWVGFISLLLILTPLFARHCEQVFLTVNPEIYQTSYSLGANDWQFVKCFLLKEARSDLILRA VSLFSTSLAYSSVLGIVGHEGIGEIAISRGYNGDSYLLESHGFNSLNLIIVCALVMFLLTQIVQLIGSFVANKLNKR
Sequences:
>Translated_237_residues MMFLKTLWNVIVYNEFGKYLFINAFLETIKMAFLSSLIAFFFGLFLGVYLYLLKIKNHHKRYWICNTLMNFLIATPFLLL IFLFIKFILYPFFHLSYGFWVGFISLLLILTPLFARHCEQVFLTVNPEIYQTSYSLGANDWQFVKCFLLKEARSDLILRA VSLFSTSLAYSSVLGIVGHEGIGEIAISRGYNGDSYLLESHGFNSLNLIIVCALVMFLLTQIVQLIGSFVANKLNKR >Mature_237_residues MMFLKTLWNVIVYNEFGKYLFINAFLETIKMAFLSSLIAFFFGLFLGVYLYLLKIKNHHKRYWICNTLMNFLIATPFLLL IFLFIKFILYPFFHLSYGFWVGFISLLLILTPLFARHCEQVFLTVNPEIYQTSYSLGANDWQFVKCFLLKEARSDLILRA VSLFSTSLAYSSVLGIVGHEGIGEIAISRGYNGDSYLLESHGFNSLNLIIVCALVMFLLTQIVQLIGSFVANKLNKR
Specific function: Probably Part Of A Binding-Protein-Dependent Transport System. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786397, Length=161, Percent_Identity=27.9503105590062, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27349; Mature: 27349
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFLKTLWNVIVYNEFGKYLFINAFLETIKMAFLSSLIAFFFGLFLGVYLYLLKIKNHHK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RYWICNTLMNFLIATPFLLLIFLFIKFILYPFFHLSYGFWVGFISLLLILTPLFARHCEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLTVNPEIYQTSYSLGANDWQFVKCFLLKEARSDLILRAVSLFSTSLAYSSVLGIVGHE HHHEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIGEIAISRGYNGDSYLLESHGFNSLNLIIVCALVMFLLTQIVQLIGSFVANKLNKR CCCHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMFLKTLWNVIVYNEFGKYLFINAFLETIKMAFLSSLIAFFFGLFLGVYLYLLKIKNHHK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RYWICNTLMNFLIATPFLLLIFLFIKFILYPFFHLSYGFWVGFISLLLILTPLFARHCEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLTVNPEIYQTSYSLGANDWQFVKCFLLKEARSDLILRAVSLFSTSLAYSSVLGIVGHE HHHEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIGEIAISRGYNGDSYLLESHGFNSLNLIIVCALVMFLLTQIVQLIGSFVANKLNKR CCCHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA