| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is znuB [H]
Identifier: 197294528
GI number: 197294528
Start: 478522
End: 479427
Strand: Direct
Name: znuB [H]
Synonym: PAa_0483
Alternate gene names: 197294528
Gene position: 478522-479427 (Clockwise)
Preceding gene: 197294527
Following gene: 197294529
Centisome position: 54.38
GC content: 26.49
Gene sequence:
>906_bases ATGGCACTTCGAGAAATTATAGAAATATTAACCAAATATAACACCCTTAAGATCTTTTTAGGGGTTGTTTTATTGGGTTT TGCTGCAGGTATTTTAGGTAATTTTGTTATTTTAAAACAAAAAGCCTTATTAGGTGATTTTATTTCGCATACTGTTTTGC CAGGAATTGCTTTGGCTTATCTTTTTTTTCGCAAAACTGATATTTGGGTTATTTGGATAGGTTCTTTTGGTGCTTCCATT ATTTCTTTGTTTTTGATGGAAATTATCAAAAGATATTCTAAAATCAAATTAGATACAGTTTTATCTTTGGTTTTGTCATC TTTTTTTGGATTAGGTAATGTTTTATTGGCTTATGCTCAAAAAGGAAACGAAGATAGCTCAATTGCTGTTTTAGAAAAAT TTGTTTTAGGACAGGCAGCTTTAATGGAACAAAAAGATGTTATTTTTATTGCTCTTGGTTCTTTAATTGTTTTAATCGTT GTTTTTTTATTATGGAAAGAATTAAAACTTTTTGTTTTTGATGAAATTTTTGCCCAAAGTATAGGTTTTAATAATGTTTT AATTACTTGTATTTTTAACGCTTTATTAATTGGTGTTATCGTAATTAGTTTAAAAATTACAGGAATTATTTTAACTAGTG CTTTTTTTATTATGCCAAGTATTATTTCTCGTCAAATAAGTGATAAATTATCAGTTAACGTAATACTTTCTTCTGTCATT ATGGTTTTTTCTGGTTTTGTTGGTATAGTTGTAAGCACTTTGAACGATAATGTTCCTACTGGACCAACTATTATTATTGT AACTGGGATTGTTCTTTTTTTAGTTCTTTTGTTGGCGCCTAAATATGGTTTTATTTCTAGAAAAATATTTAATTCAAAAA AAGAAAAAGTTTTTAAATTTAATTAA
Upstream 100 bases:
>100_bases AACTTTCACTCCTGAAAATATTGCAAAAACTTATCAATCTTATCAATTAGAAGATTTTTCTTCCTCCCCTCTGAAAAGCA AATGAGAAAGGTAAATTTTT
Downstream 100 bases:
>100_bases TGGTTAGGTACAAAAATGTTAAATATAACTAATCAGTTTGATTGGGAAGTTTATGTAGTTTTAATTTTTTGCTCTTTGGC TTTATCGGTTTTAGGTGTTT
Product: ABC-type Zn/Mn transport system,permease component
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MALREIIEILTKYNTLKIFLGVVLLGFAAGILGNFVILKQKALLGDFISHTVLPGIALAYLFFRKTDIWVIWIGSFGASI ISLFLMEIIKRYSKIKLDTVLSLVLSSFFGLGNVLLAYAQKGNEDSSIAVLEKFVLGQAALMEQKDVIFIALGSLIVLIV VFLLWKELKLFVFDEIFAQSIGFNNVLITCIFNALLIGVIVISLKITGIILTSAFFIMPSIISRQISDKLSVNVILSSVI MVFSGFVGIVVSTLNDNVPTGPTIIIVTGIVLFLVLLLAPKYGFISRKIFNSKKEKVFKFN
Sequences:
>Translated_301_residues MALREIIEILTKYNTLKIFLGVVLLGFAAGILGNFVILKQKALLGDFISHTVLPGIALAYLFFRKTDIWVIWIGSFGASI ISLFLMEIIKRYSKIKLDTVLSLVLSSFFGLGNVLLAYAQKGNEDSSIAVLEKFVLGQAALMEQKDVIFIALGSLIVLIV VFLLWKELKLFVFDEIFAQSIGFNNVLITCIFNALLIGVIVISLKITGIILTSAFFIMPSIISRQISDKLSVNVILSSVI MVFSGFVGIVVSTLNDNVPTGPTIIIVTGIVLFLVLLLAPKYGFISRKIFNSKKEKVFKFN >Mature_300_residues ALREIIEILTKYNTLKIFLGVVLLGFAAGILGNFVILKQKALLGDFISHTVLPGIALAYLFFRKTDIWVIWIGSFGASII SLFLMEIIKRYSKIKLDTVLSLVLSSFFGLGNVLLAYAQKGNEDSSIAVLEKFVLGQAALMEQKDVIFIALGSLIVLIVV FLLWKELKLFVFDEIFAQSIGFNNVLITCIFNALLIGVIVISLKITGIILTSAFFIMPSIISRQISDKLSVNVILSSVIM VFSGFVGIVVSTLNDNVPTGPTIIIVTGIVLFLVLLLAPKYGFISRKIFNSKKEKVFKFN
Specific function: This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=269, Percent_Identity=23.4200743494424, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 - InterPro: IPR011991 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 33197; Mature: 33066
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALREIIEILTKYNTLKIFLGVVLLGFAAGILGNFVILKQKALLGDFISHTVLPGIALAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFRKTDIWVIWIGSFGASIISLFLMEIIKRYSKIKLDTVLSLVLSSFFGLGNVLLAYAQ HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGNEDSSIAVLEKFVLGQAALMEQKDVIFIALGSLIVLIVVFLLWKELKLFVFDEIFAQS CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFNNVLITCIFNALLIGVIVISLKITGIILTSAFFIMPSIISRQISDKLSVNVILSSVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVFSGFVGIVVSTLNDNVPTGPTIIIVTGIVLFLVLLLAPKYGFISRKIFNSKKEKVFKF HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCC N C >Mature Secondary Structure ALREIIEILTKYNTLKIFLGVVLLGFAAGILGNFVILKQKALLGDFISHTVLPGIALAY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFRKTDIWVIWIGSFGASIISLFLMEIIKRYSKIKLDTVLSLVLSSFFGLGNVLLAYAQ HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGNEDSSIAVLEKFVLGQAALMEQKDVIFIALGSLIVLIVVFLLWKELKLFVFDEIFAQS CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFNNVLITCIFNALLIGVIVISLKITGIILTSAFFIMPSIISRQISDKLSVNVILSSVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVFSGFVGIVVSTLNDNVPTGPTIIIVTGIVLFLVLLLAPKYGFISRKIFNSKKEKVFKF HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 10760146 [H]