| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294523
Identifier: 197294523
GI number: 197294523
Start: 471804
End: 472145
Strand: Direct
Name: 197294523
Synonym: PAa_0476
Alternate gene names: NA
Gene position: 471804-472145 (Clockwise)
Preceding gene: 197294517
Following gene: 197294525
Centisome position: 53.62
GC content: 28.07
Gene sequence:
>342_bases ATGAGAATTTTAGTTGGAAAAAATAATGTTTTCAAGTTATTATGGTTAATTTTAAAAAATCAGCAAAAAAAGTTTTGTCA AAAATGCCAAAAAACAGACGTTATGGGACGGATATGGTCCTTAAAAATGGGGTTGTTAAATAACAAAATAGTATTTTTAA GGACCATATCCTTCGATCCTGAAACAGGTGAAGAAATCAAAAAAATTAAGCACTTTTACCAAAAAAAAGATAATCAAAAA ATTGATTGCGTTCAAGAAAACGATCATCGAACAAACGAATGCAAATTCATTATTTACAAATCCGACTGTAAAACAGTTTC CGTGAACAGGTTAAAAAAATAA
Upstream 100 bases:
>100_bases CATTTACAACAAAAAACCACATAATAATGTGATTCAATATTATTGAATTATTATTGAAAACAATTTTAATTAATACTTCA CTTAAACATTATAGCAAATT
Downstream 100 bases:
>100_bases AAGATAACTATTAAACAATTTTTTTAACCCTTAAACCACGACCCATCCCCTAATGTTTTTTTTATTATTCATCACCCCCC CTCAAATAATTTTTCTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MRILVGKNNVFKLLWLILKNQQKKFCQKCQKTDVMGRIWSLKMGLLNNKIVFLRTISFDPETGEEIKKIKHFYQKKDNQK IDCVQENDHRTNECKFIIYKSDCKTVSVNRLKK
Sequences:
>Translated_113_residues MRILVGKNNVFKLLWLILKNQQKKFCQKCQKTDVMGRIWSLKMGLLNNKIVFLRTISFDPETGEEIKKIKHFYQKKDNQK IDCVQENDHRTNECKFIIYKSDCKTVSVNRLKK >Mature_113_residues MRILVGKNNVFKLLWLILKNQQKKFCQKCQKTDVMGRIWSLKMGLLNNKIVFLRTISFDPETGEEIKKIKHFYQKKDNQK IDCVQENDHRTNECKFIIYKSDCKTVSVNRLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13524; Mature: 13524
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVGKNNVFKLLWLILKNQQKKFCQKCQKTDVMGRIWSLKMGLLNNKIVFLRTISFDP CEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCC ETGEEIKKIKHFYQKKDNQKIDCVQENDHRTNECKFIIYKSDCKTVSVNRLKK CCCHHHHHHHHHHHCCCCCEECEEECCCCCCCCEEEEEECCCCCEECCCCCCC >Mature Secondary Structure MRILVGKNNVFKLLWLILKNQQKKFCQKCQKTDVMGRIWSLKMGLLNNKIVFLRTISFDP CEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCC ETGEEIKKIKHFYQKKDNQKIDCVQENDHRTNECKFIIYKSDCKTVSVNRLKK CCCHHHHHHHHHHHCCCCCEECEEECCCCCCCCEEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA