Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is 197294522

Identifier: 197294522

GI number: 197294522

Start: 471336

End: 471659

Strand: Reverse

Name: 197294522

Synonym: PAa_0475

Alternate gene names: NA

Gene position: 471659-471336 (Counterclockwise)

Preceding gene: 197294524

Following gene: 197294521

Centisome position: 53.6

GC content: 27.16

Gene sequence:

>324_bases
ATGAATCACGATAAAAAAGTAGTTAAATTAGAAAATATCTATTTAGAAGTGCAAGCAAGATATTTAAAAACAGCAGATGG
GTTTAAAAAAGAATGGTTTGGTCATTTTAATAATCAAAACACAAAATATAATAACGTAATTGTTAGTTTTGCTCATATTG
ACCAAGATAATCCAGAATTTTTTTTGCAACCAGGACAAGTAGTTAAAGTTTTAGAAGGTGAAATGAGAGAAGAAAAAAAA
GAATCTTCAAGCCAATTTTTTTTAGATGTAGTAACTTTTAGACAAACCGACGACGAAGAAAAAAACAAAATCAACCACAT
ATAA

Upstream 100 bases:

>100_bases
CAATAATAATTCAATAATATTGAATCACATTATTATGTGGTTTTTTGTTGTAAATGTTGAGAAAATAATCAGAAAAACAA
GGAAGGTTTAATTTAAAAAA

Downstream 100 bases:

>100_bases
CAGGGGTTGATTTTTTTTATCTCTAAAAAGAAAAAATTAGAGAAGGGATTTTTTTGCAAAAAAAATTGAGGAATTGTGGG
ATTGATTAAGGTGTTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNHDKKVVKLENIYLEVQARYLKTADGFKKEWFGHFNNQNTKYNNVIVSFAHIDQDNPEFFLQPGQVVKVLEGEMREEKK
ESSSQFFLDVVTFRQTDDEEKNKINHI

Sequences:

>Translated_107_residues
MNHDKKVVKLENIYLEVQARYLKTADGFKKEWFGHFNNQNTKYNNVIVSFAHIDQDNPEFFLQPGQVVKVLEGEMREEKK
ESSSQFFLDVVTFRQTDDEEKNKINHI
>Mature_107_residues
MNHDKKVVKLENIYLEVQARYLKTADGFKKEWFGHFNNQNTKYNNVIVSFAHIDQDNPEFFLQPGQVVKVLEGEMREEKK
ESSSQFFLDVVTFRQTDDEEKNKINHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12724; Mature: 12724

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDKKVVKLENIYLEVQARYLKTADGFKKEWFGHFNNQNTKYNNVIVSFAHIDQDNPEF
CCCCCCEEEEEHEEEEEHHHHHHCCCCHHHHHCCCCCCCCCEECCEEEEEEECCCCCCCE
FLQPGQVVKVLEGEMREEKKESSSQFFLDVVTFRQTDDEEKNKINHI
EECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHCCCCC
>Mature Secondary Structure
MNHDKKVVKLENIYLEVQARYLKTADGFKKEWFGHFNNQNTKYNNVIVSFAHIDQDNPEF
CCCCCCEEEEEHEEEEEHHHHHHCCCCHHHHHCCCCCCCCCEECCEEEEEEECCCCCCCE
FLQPGQVVKVLEGEMREEKKESSSQFFLDVVTFRQTDDEEKNKINHI
EECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA