| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294515
Identifier: 197294515
GI number: 197294515
Start: 457682
End: 457921
Strand: Direct
Name: 197294515
Synonym: PAa_0457
Alternate gene names: NA
Gene position: 457682-457921 (Clockwise)
Preceding gene: 197294514
Following gene: 197294516
Centisome position: 52.01
GC content: 22.5
Gene sequence:
>240_bases TTGCAAGTTAAAAAAAGACTAACTCAAAAGCTAGTCTTAAATATAAAAATTTTCATTTTTTTAATTTGCAAGCGAGTGTA TGAAAATAAGTTAGGTTTTTTCTGCTTTCTAAAAATAAGACTTATTTTTCTTTATTGTCTGTTATTTTTTATTTTTTTGT TAGTTTTTTTAAAATATTTCAAATGCATTCAACTTCATATCGTGATGTTTCGGCATTTAGGGCACTTTTTATTTTTTTAA
Upstream 100 bases:
>100_bases TGCAAGCTTTTTGGCTAAATTAGTTAAGTGTTTTTTTGTTAACTTTTGGCTTTTGAAAGTTTAAAAAAAAGTTCATTATT CAAAATATAATGTTGGTATT
Downstream 100 bases:
>100_bases AAAAAATTAAGACTGACTTATTTTTAGTCGGTCTTTTTTTGTTTTAAAAATATTTATTAAAACTAACAAAACAAATTAAT TAAACTAAAAAACTGTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MQVKKRLTQKLVLNIKIFIFLICKRVYENKLGFFCFLKIRLIFLYCLLFFIFLLVFLKYFKCIQLHIVMFRHLGHFLFF
Sequences:
>Translated_79_residues MQVKKRLTQKLVLNIKIFIFLICKRVYENKLGFFCFLKIRLIFLYCLLFFIFLLVFLKYFKCIQLHIVMFRHLGHFLFF >Mature_79_residues MQVKKRLTQKLVLNIKIFIFLICKRVYENKLGFFCFLKIRLIFLYCLLFFIFLLVFLKYFKCIQLHIVMFRHLGHFLFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9862; Mature: 9862
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVKKRLTQKLVLNIKIFIFLICKRVYENKLGFFCFLKIRLIFLYCLLFFIFLLVFLKYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCIQLHIVMFRHLGHFLFF HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQVKKRLTQKLVLNIKIFIFLICKRVYENKLGFFCFLKIRLIFLYCLLFFIFLLVFLKYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCIQLHIVMFRHLGHFLFF HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA