| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is artM [H]
Identifier: 197294508
GI number: 197294508
Start: 446683
End: 448422
Strand: Reverse
Name: artM [H]
Synonym: PAa_0450
Alternate gene names: 197294508
Gene position: 448422-446683 (Counterclockwise)
Preceding gene: 197294509
Following gene: 197294507
Centisome position: 50.96
GC content: 27.01
Gene sequence:
>1740_bases ATGAAACTTTACTTAAAATTTTTTCATTATATTAAAAAAAATTATTTAAAATTAACTAAAATCTTAATTATTGTTGTTTT TGTTTTCTTACTTATTTTAGGACATTATTATGTGTTTGCAAAAGCCAATTCCAAAGAGCAAAAACAAACTCAAAGCGATC AAAAAGTTTTAAAAGTAGGGATTGTGAATACTTTAGGTTTAACAGGTTTTGATGTAGATGATAAAGCCCCAAATGGCAAA CAAACTATTAATGGAGGAAAAATTTCTGGCACTGATGTTTTTTTATTTGAGGCTTTGGCTAAAAAAATAGGCGCTAAATT AGAAATTACTGTCGTTGATAAAGATGGGATGTTGACTAATTTAAATATTGACAAATATGATGTTATTAGTAGTGGTCATA ATTATACGGAGGAACGCGCAGATAATTACGATGTAGAAAAAATGTATAAGGTTGACGTTGCAATGTTGATTAAAACAAAA AATAAAGATACATTTAAAAAATTTAAAGTTGAGAATGGCCAAATGTCATTATTTGATAAACCTTATCCAAAATTAGAACG AAAGATTAAATTAACTACTTGGAAAAACTCTGAATATTCAAAAAAAATCGAAAAGGAAATAAATGAAATAAAGAAAATAA AAGGAAACAATACACCTTTTGAAGCTGACGAATCATTATTGTCATTAGATAACAACAGTCGAGGGTTTTATAATATAATT GAAGATTTAGCTGATGGTTATATTATTGAGGATAATTTATTATCTTTAGAGATGGAACTTCATAATACAAAAACAGAAGA CAAAGACCAAAAGTTAGAAATGATTAAATTATCAGATTGGGATTTACCCGAAATGGGGCTTTTTTTCAAAAAAGGTACTA CTGAAAAGCCAGAAACTATTCAAAAGGAATTAAAAGATGAATTGGATAATTTATCGAAAGAAAAAAAACAAGAAATATAC ACAAATGCTATTGAAAAGTCTGAAAAAGATTATAGATATATGGCCTCTAAAAGAATCGAACAAAACGCAAATATTTTTAA GAAAATAATTGCTTTTGCACCTTCTTACGGAAAACCTTTTTTAGTTTCGCTTATTATTAGTATTGATGGTTTATTTTTAG GATTTTTGTTAGGGTTGGGGTTAGTAAAGGCGAAATACTTCAATCCTCAATTAGAAACTGCCAACAAATTTTTATCTTAT ATTAAAAAAACCGCTGCTTTTTTAATTGATTGTGCTTTTGGTTTTTTCCAGGCAGTACCTGTACTTATCCAAGGACTTTT ATTTTATTTTTTAATCTTAATAATTACAAAAAAACATTTCCATATCGATTTTTTTATTACTAATGAAGGTATTTTTGTTA TTTCTTTAACTGTTATTATTCTCAATACCGCTGTTTTTCTAGCCTCTACTATGCTAAATCATATCAAATTTTTAGATAGT GGACAAATTGAAGGATCAGTTGCTTTAGGGATGAAACCAAAACAAGTTTTTCGCTATATCATTTTTTCACAAAGTATAAA AAGAACTTATCCTTCTATTTGGAGTCAATTTATCGTTAATATTAAAGATACAGCTTTATTTTCTAGCATTGGTTTGGCAG GAGTTATTTGGCAAGCTAAAAGGAATATTGCAACAAATGGCGACACTATAACGCCTTATCTAACTATTAGCATTATTTAT ATCATTTTGGTTTTAAGTACAAATTTAATTAAGAAAATGACAATGAAATATTTTCAATAA
Upstream 100 bases:
>100_bases TTAAAAGAATTTTTTACAAGATAATTTTTGTTTCAAAAATATTTTTCGGTTTTTCCCAAAAAAAGGATTAATAACAAAAA AACAAAAAAGGAGAATTTCT
Downstream 100 bases:
>100_bases TTTTGTTTAATATTTTAATATTAAACAAGCAAAAAATATAAAATTAAAAAGTTTTTGCAAAGTTTTACAAGATTAATCAA ATAAGCTACACTCAACATCA
Product: Amino acid ABC transporter permease component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVGIVNTLGLTGFDVDDKAPNGK QTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTNLNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTK NKDTFKKFKVENGQMSLFDKPYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETIQKELKDELDNLSKEKKQEIY TNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPFLVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSY IKKTAAFLIDCAFGFFQAVPVLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAKRNIATNGDTITPYLTISIIY IILVLSTNLIKKMTMKYFQ
Sequences:
>Translated_579_residues MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVGIVNTLGLTGFDVDDKAPNGK QTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTNLNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTK NKDTFKKFKVENGQMSLFDKPYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETIQKELKDELDNLSKEKKQEIY TNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPFLVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSY IKKTAAFLIDCAFGFFQAVPVLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAKRNIATNGDTITPYLTISIIY IILVLSTNLIKKMTMKYFQ >Mature_579_residues MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVGIVNTLGLTGFDVDDKAPNGK QTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTNLNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTK NKDTFKKFKVENGQMSLFDKPYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETIQKELKDELDNLSKEKKQEIY TNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPFLVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSY IKKTAAFLIDCAFGFFQAVPVLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAKRNIATNGDTITPYLTISIIY IILVLSTNLIKKMTMKYFQ
Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=29.3577981651376, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=25.3521126760563, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 66354; Mature: 66354
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH IVNTLGLTGFDVDDKAPNGKQTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTN HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCEEEE LNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTKNKDTFKKFKVENGQMSLFDK CCCCHHHHHCCCCCCCHHHCCCCCHHHHHHHCEEEEEEECCCHHHHHHEECCCCEECCCC PYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII CCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHH EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETI HHHHCCEEEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHH QKELKDELDNLSKEKKQEIYTNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPF HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSYIKKTAAFLIDCAFGFFQAVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS HHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAK CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH RNIATNGDTITPYLTISIIYIILVLSTNLIKKMTMKYFQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH IVNTLGLTGFDVDDKAPNGKQTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTN HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCEEEE LNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTKNKDTFKKFKVENGQMSLFDK CCCCHHHHHCCCCCCCHHHCCCCCHHHHHHHCEEEEEEECCCHHHHHHEECCCCEECCCC PYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII CCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHH EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETI HHHHCCEEEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHH QKELKDELDNLSKEKKQEIYTNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPF HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSYIKKTAAFLIDCAFGFFQAVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS HHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAK CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH RNIATNGDTITPYLTISIIYIILVLSTNLIKKMTMKYFQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]