| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294503
Identifier: 197294503
GI number: 197294503
Start: 437098
End: 438582
Strand: Direct
Name: 197294503
Synonym: PAa_0442
Alternate gene names: NA
Gene position: 437098-438582 (Clockwise)
Preceding gene: 197294502
Following gene: 197294504
Centisome position: 49.67
GC content: 29.56
Gene sequence:
>1485_bases ATGTTATTAATTATCATCTTCAATTTTGTCCCTTCCATCAATACTCATTCTTCTTATTTTCATAGTCAAAACAAAACCAA AATTAAATTAGCAGATTACGAAACCCTCCAACAAGAATGGTTAGCGACCCAACCCAAAATGAAAAGATATGACATTCCTG TTTTATCCAAAGAAATTATCCCTGAAATCCTAAAATATTTCAATATTGAAACTTCTACTTATGGGTTGGATAAGTCGACT TACAATCCTTATGCCAAAAATATCTTCTACTGGAAACTCAAAAATCCTCCTGCAGGTTTATTAGGGGTTTATTTTAAAGC CAGAAAAAATCCTTTTAAAATTAAATATCCCAAAGATGACGATGAATACACCTTAGATGACCTTTTAAAATACGAAATCG CTATCGAAGAAGCTTTCGTATTTTGGGATATTCAACAAAAAACTCAGGAAGAAAAGGACAATATGGAATTAATCTTCATC AATCACTTTGTTGACCAAAGTAAAGAAGAAGCGATTAAGAATTACTTAATCCAACATAAAACCAACCAAGAACCCAAACT AATTAAATTAGGTTGTTATAATATTACCCCTACCACAGGTTTAATCGCTCCTTTACCTTTAGGTGGATTGGGTGGTATTG AAATTGAGGCTATTTATTTCGATGATGGAATTCGTCTGCTCCCTGAAAACCAAAAAACTAGATCTTTAAAAGGGATCATA AAATTTCGAGAAGAATTGATAAAAGACTACCAAACTGAATTAAATCAAACTGAAGATGAAAGAAGAAAAAAGTTATTGAC AAAACAAATTGTATCTTTACAAGAAGAAATTAAAGAACTTTACCAAGAAATCATCAAACAACAAACTTACACCATTGAAG ATTTATTGAAACTCTCCAATGGCGCCAAAAACATCTATCTTTTTTCTTTCAATACTCAAAAAAGAATTAAAAGTATTGAA TTACCTGATGCTATTGATCCTTACCAAGCCATTCGTGATTGGAAACGAGACAATAATTTATTTGATTATGAAGGTGAATT TATACTAAAAACTTTTATCGTAAATGATCCTTTAATTTTACCACCACCTTTTAATAAAGAAATTAATCTATCGTGTAAAA TTAATCAACTTGAAAATATTTTTAAAACCGAAAAGAAAAAATTTCTTATTTCTTGCCAAGATGTCGAACCAAAAAAGGAT TTTTTTCAAATTTATAAATCTAAATATGTTGATTGGTTAAACCAATGTTACATTAAACCTGGCATTTCTTATTCAGCTAA AGAAATAAGAAATAAATTTGGCCGTTCATCAAGAGACATTTATAATGAAGAAGGGAAAAAATGTAGATATTATTATGTTA CAAATACCTTCATAGATGATTGGTACGTTAATGGGATTGAATGTTCTGGCTCAAACAATACTTTTTCTAATTTTTATGAC ACCACTCCACCACCCAAAAAACCTCAAGAATTAAATATTAATTGA
Upstream 100 bases:
>100_bases TACCATTTGTCAGGCAACAAAAAATTAAAAAAAGAATTAGGAGGTTATTAAATAATGTTTAAAGTAATTATAATCCCCTT TATCTAAAAAATTAATAATT
Downstream 100 bases:
>100_bases TATTAAGACCTCCAAATGGAGGTCATTTTTTTTGGCTCATTTTTGTTAAAATCAAAAAAAAGAATTTGTGTTCTAATAAA GAAGAAGTCAAAAAAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MLLIIIFNFVPSINTHSSYFHSQNKTKIKLADYETLQQEWLATQPKMKRYDIPVLSKEIIPEILKYFNIETSTYGLDKST YNPYAKNIFYWKLKNPPAGLLGVYFKARKNPFKIKYPKDDDEYTLDDLLKYEIAIEEAFVFWDIQQKTQEEKDNMELIFI NHFVDQSKEEAIKNYLIQHKTNQEPKLIKLGCYNITPTTGLIAPLPLGGLGGIEIEAIYFDDGIRLLPENQKTRSLKGII KFREELIKDYQTELNQTEDERRKKLLTKQIVSLQEEIKELYQEIIKQQTYTIEDLLKLSNGAKNIYLFSFNTQKRIKSIE LPDAIDPYQAIRDWKRDNNLFDYEGEFILKTFIVNDPLILPPPFNKEINLSCKINQLENIFKTEKKKFLISCQDVEPKKD FFQIYKSKYVDWLNQCYIKPGISYSAKEIRNKFGRSSRDIYNEEGKKCRYYYVTNTFIDDWYVNGIECSGSNNTFSNFYD TTPPPKKPQELNIN
Sequences:
>Translated_494_residues MLLIIIFNFVPSINTHSSYFHSQNKTKIKLADYETLQQEWLATQPKMKRYDIPVLSKEIIPEILKYFNIETSTYGLDKST YNPYAKNIFYWKLKNPPAGLLGVYFKARKNPFKIKYPKDDDEYTLDDLLKYEIAIEEAFVFWDIQQKTQEEKDNMELIFI NHFVDQSKEEAIKNYLIQHKTNQEPKLIKLGCYNITPTTGLIAPLPLGGLGGIEIEAIYFDDGIRLLPENQKTRSLKGII KFREELIKDYQTELNQTEDERRKKLLTKQIVSLQEEIKELYQEIIKQQTYTIEDLLKLSNGAKNIYLFSFNTQKRIKSIE LPDAIDPYQAIRDWKRDNNLFDYEGEFILKTFIVNDPLILPPPFNKEINLSCKINQLENIFKTEKKKFLISCQDVEPKKD FFQIYKSKYVDWLNQCYIKPGISYSAKEIRNKFGRSSRDIYNEEGKKCRYYYVTNTFIDDWYVNGIECSGSNNTFSNFYD TTPPPKKPQELNIN >Mature_494_residues MLLIIIFNFVPSINTHSSYFHSQNKTKIKLADYETLQQEWLATQPKMKRYDIPVLSKEIIPEILKYFNIETSTYGLDKST YNPYAKNIFYWKLKNPPAGLLGVYFKARKNPFKIKYPKDDDEYTLDDLLKYEIAIEEAFVFWDIQQKTQEEKDNMELIFI NHFVDQSKEEAIKNYLIQHKTNQEPKLIKLGCYNITPTTGLIAPLPLGGLGGIEIEAIYFDDGIRLLPENQKTRSLKGII KFREELIKDYQTELNQTEDERRKKLLTKQIVSLQEEIKELYQEIIKQQTYTIEDLLKLSNGAKNIYLFSFNTQKRIKSIE LPDAIDPYQAIRDWKRDNNLFDYEGEFILKTFIVNDPLILPPPFNKEINLSCKINQLENIFKTEKKKFLISCQDVEPKKD FFQIYKSKYVDWLNQCYIKPGISYSAKEIRNKFGRSSRDIYNEEGKKCRYYYVTNTFIDDWYVNGIECSGSNNTFSNFYD TTPPPKKPQELNIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58365; Mature: 58365
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIIIFNFVPSINTHSSYFHSQNKTKIKLADYETLQQEWLATQPKMKRYDIPVLSKEII CEEEEEEECCCCCCCCHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCHHCCCCHHHHHHH PEILKYFNIETSTYGLDKSTYNPYAKNIFYWKLKNPPAGLLGVYFKARKNPFKIKYPKDD HHHHHHHCCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC DEYTLDDLLKYEIAIEEAFVFWDIQQKTQEEKDNMELIFINHFVDQSKEEAIKNYLIQHK CCCCHHHHHHHHHEEEEEEEEEECHHHHHHHCCCEEEEEEEHHHCCCHHHHHHHHHHHCC TNQEPKLIKLGCYNITPTTGLIAPLPLGGLGGIEIEAIYFDDGIRLLPENQKTRSLKGII CCCCCCEEEEEEEECCCCCCCEECCCCCCCCCEEEEEEEECCCCEECCCCCHHHHHHHHH KFREELIKDYQTELNQTEDERRKKLLTKQIVSLQEEIKELYQEIIKQQTYTIEDLLKLSN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC GAKNIYLFSFNTQKRIKSIELPDAIDPYQAIRDWKRDNNLFDYEGEFILKTFIVNDPLIL CCCEEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHCCCEECCCCCEEEEEEEECCCEEC PPPFNKEINLSCKINQLENIFKTEKKKFLISCQDVEPKKDFFQIYKSKYVDWLNQCYIKP CCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECC GISYSAKEIRNKFGRSSRDIYNEEGKKCRYYYVTNTFIDDWYVNGIECSGSNNTFSNFYD CCCCCHHHHHHHHCCCCCHHHHCCCCEEEEEEEEECEECCEEECCEEECCCCCCCCCCCC TTPPPKKPQELNIN CCCCCCCCCCCCCC >Mature Secondary Structure MLLIIIFNFVPSINTHSSYFHSQNKTKIKLADYETLQQEWLATQPKMKRYDIPVLSKEII CEEEEEEECCCCCCCCHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCHHCCCCHHHHHHH PEILKYFNIETSTYGLDKSTYNPYAKNIFYWKLKNPPAGLLGVYFKARKNPFKIKYPKDD HHHHHHHCCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC DEYTLDDLLKYEIAIEEAFVFWDIQQKTQEEKDNMELIFINHFVDQSKEEAIKNYLIQHK CCCCHHHHHHHHHEEEEEEEEEECHHHHHHHCCCEEEEEEEHHHCCCHHHHHHHHHHHCC TNQEPKLIKLGCYNITPTTGLIAPLPLGGLGGIEIEAIYFDDGIRLLPENQKTRSLKGII CCCCCCEEEEEEEECCCCCCCEECCCCCCCCCEEEEEEEECCCCEECCCCCHHHHHHHHH KFREELIKDYQTELNQTEDERRKKLLTKQIVSLQEEIKELYQEIIKQQTYTIEDLLKLSN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC GAKNIYLFSFNTQKRIKSIELPDAIDPYQAIRDWKRDNNLFDYEGEFILKTFIVNDPLIL CCCEEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHCCCEECCCCCEEEEEEEECCCEEC PPPFNKEINLSCKINQLENIFKTEKKKFLISCQDVEPKKDFFQIYKSKYVDWLNQCYIKP CCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECC GISYSAKEIRNKFGRSSRDIYNEEGKKCRYYYVTNTFIDDWYVNGIECSGSNNTFSNFYD CCCCCHHHHHHHHCCCCCHHHHCCCCEEEEEEEEECEECCEEECCEEECCCCCCCCCCCC TTPPPKKPQELNIN CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA