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The map label for this gene is 197294467

Identifier: 197294467

GI number: 197294467

Start: 402545

End: 402940

Strand: Reverse

Name: 197294467

Synonym: PAa_0395

Alternate gene names: NA

Gene position: 402940-402545 (Counterclockwise)

Preceding gene: 197294468

Following gene: 197294466

Centisome position: 45.79

GC content: 28.28

Gene sequence:

>396_bases
ATTTCGCCATCGGATTTATCAAAGAGAGAACAAGAAGAAATCAATAAACTAAAAAATAGTTGGAAAAAAAGTTTAGAACT
TTTAAAAAACAGAAAAAACCGCCCTACTGGTATTAATAAATCCCAAAAAGAATGTGAAGAATTAAAAACCCAGCTGGATT
CAATTCAACCTAAAATAGAAGATTTAAAACCACAACAACAAAAACTAGAACAACAACGCGACGAAAAAGAAGAAATATTA
AAAAAAATTAAATATCAATGTGGCGAAATTTCTCCATCTTATGCAAAAACGCTTAAAAAAATGTATAATATTGAAATTAA
AAACCCAAAAATCCCAAACAAAATTGAAGAAATTAGACTGCACAAGCCGAAATTGAAAAACTCCAAGATGAAGTAA

Upstream 100 bases:

>100_bases
AAGTTTCTCATTGGCAAGAGAAAAAAGCAAGAAAAAAACAACTAAAATCGCAAAACATCAACCCAATTATTAAGAAGGAG
GAAGAAAATGAATGATCTAA

Downstream 100 bases:

>100_bases
TAGAATTGGTTGGAAAAATCGACAAAATAAAAATCGAAATCAAAAAATTAGAATCAAAACAAAAAATGTATCAAGATATG
TTATCTCGTGCTGAAAAATT

Product: Putative RNA polymerase sigma factor,fragment

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MSPSDLSKREQEEINKLKNSWKKSLELLKNRKNRPTGINKSQKECEELKTQLDSIQPKIEDLKPQQQKLEQQRDEKEEIL
KKIKYQCGEISPSYAKTLKKMYNIEIKNPKIPNKIEEIRLHKPKLKNSKMK

Sequences:

>Translated_131_residues
MSPSDLSKREQEEINKLKNSWKKSLELLKNRKNRPTGINKSQKECEELKTQLDSIQPKIEDLKPQQQKLEQQRDEKEEIL
KKIKYQCGEISPSYAKTLKKMYNIEIKNPKIPNKIEEIRLHKPKLKNSKMK
>Mature_130_residues
SPSDLSKREQEEINKLKNSWKKSLELLKNRKNRPTGINKSQKECEELKTQLDSIQPKIEDLKPQQQKLEQQRDEKEEILK
KIKYQCGEISPSYAKTLKKMYNIEIKNPKIPNKIEEIRLHKPKLKNSKMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15600; Mature: 15469

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSDLSKREQEEINKLKNSWKKSLELLKNRKNRPTGINKSQKECEELKTQLDSIQPKIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
DLKPQQQKLEQQRDEKEEILKKIKYQCGEISPSYAKTLKKMYNIEIKNPKIPNKIEEIRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
HKPKLKNSKMK
CCCCCCCCCCC
>Mature Secondary Structure 
SPSDLSKREQEEINKLKNSWKKSLELLKNRKNRPTGINKSQKECEELKTQLDSIQPKIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
DLKPQQQKLEQQRDEKEEILKKIKYQCGEISPSYAKTLKKMYNIEIKNPKIPNKIEEIRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
HKPKLKNSKMK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA