| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294445
Identifier: 197294445
GI number: 197294445
Start: 377407
End: 378927
Strand: Reverse
Name: 197294445
Synonym: PAa_0366
Alternate gene names: NA
Gene position: 378927-377407 (Counterclockwise)
Preceding gene: 197294446
Following gene: 197294444
Centisome position: 43.06
GC content: 38.0
Gene sequence:
>1521_bases TTGGCACACCAAACAGCCATCAAAGATAGGTTTATTTTTTGGGACGCCAACAAACACCCTCAAGAAATAAAATGCAACAC TCACTTAATCTCCATCAAACTCCCTGAAGGCCGAAGCAAAACAGAAGCAATTAAAAATTACTTAACTGCCCACAACATCA CCAAAAACCCTGTAGACATTAAGTTAGGATGTTACAAAGCATTTCCAAATGACGACGCATTCTTAAATTTTCCCCTAGGA GACTACAAACCTGACTCAAAAACAATAACTGAATACGACCCATCAACAGGCAACAAAACAAAAACAATCAAAGAAACCAT AAAAACAATTTACTACGACAACAGTCAAACAATTAAAGAAATTATCCAATACACCCCAGATATCCACATAGGAAAAAGAA CAAAACATGTCCTTTATCATCCTGATGGCTCACTTGATTTCGTTACCATATATAACTCTGACGGTAACCGAACGAAAGAA TTTCAATACAGACCAGACGGCACAATTAAAACGCAAAAAACATATTACGACTCAGGGAAATTATGTGAAATATCTAACTA TGATACAAAAGATTACACTTTATTTAAACGAAATGGTAGAATTTGGGACGAATATCGCCTATCGACAACCCAACCAGATG CCCCTCCTCAAATCCCGCTTCCCTACAACATCGAACACACACCATCCCCTCACCAAAAATTCAATCCAGAAGCGATTTAT TTCGACGACGGAATCCGCTTCCTCCCTTCAGAATCTCCAGAAGTAGAACGCTTAAAAAAAGACCTAACACGCCTTCAATA CGAAGTTGAAGTCGATGAAGCACAAAACAATTCTCGTGAAACAATCAACCAAAAATTAAAAACCATTCGCGAGCTGAAAC AGCGAATAATCACTTCCCAAAAATACACTATCGAAGACTTACTCAAACTATCAAACGGAGCTAGAAATGTTTATCTTTTC TCATTCAACACCCAAAAAGAAGAAATAAACATCACCTTTCCTGATTCCCTAGACCCTCAAGAAGCCATCACAACCTGGAA ACAAGAGAACTCACAAACCCATCATCAAGGAATCACACAAATCATCAAAATTCCCAAATATACTTCAATAACTTTAGGTC CGCCCATAAACAAAGTGATAAAACACGACGCAAACCTTACAACCATTCATCATACTTTTGAAACCACCGACAAAATATAT CACATCACCTGCACCAACACAAAACAAATGACAAAAATCCTAGAGGAATACCACAATAAATATGTTTCTTGGTTACAACA ATGCTACATCAAACCAGGTGTTCGTTATACACTTGGCGACATAAAACATCATTTCGGTTATCGTCCAACAGACATCTATA ACGAAGACGGAACAAAATCCAACTTCACTTGTAGCGGCAGTGGATGGCGAGCAGTATGGTACGTAGACGAACAACCATGC AATTGGTGGTATAATATCTTTTCACATTTCTACACAACACAATCCCCACCACCAAAAACCACTGAACTAATGACAGAATA A
Upstream 100 bases:
>100_bases TCCACCAGATGGTTTATTAGCGGTTTATTTAAGAGCAAGAGATAATCCTTTTAATACTCAATACCCTCAAGCTGATAACG AATCCACCTTAGAAGAGCTT
Downstream 100 bases:
>100_bases CGCTAAAGACCTTCTCGCGAAGGTCTTTTTTCATTTAAAAATTAAATTAAGGAGAAAAAAATATGAAAATAATAATTTTT GAAGGCTTAGACGGAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MAHQTAIKDRFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVDIKLGCYKAFPNDDAFLNFPLG DYKPDSKTITEYDPSTGNKTKTIKETIKTIYYDNSQTIKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRTKE FQYRPDGTIKTQKTYYDSGKLCEISNYDTKDYTLFKRNGRIWDEYRLSTTQPDAPPQIPLPYNIEHTPSPHQKFNPEAIY FDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQKYTIEDLLKLSNGARNVYLF SFNTQKEEINITFPDSLDPQEAITTWKQENSQTHHQGITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDKIY HITCTNTKQMTKILEEYHNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDEQPC NWWYNIFSHFYTTQSPPPKTTELMTE
Sequences:
>Translated_506_residues MAHQTAIKDRFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVDIKLGCYKAFPNDDAFLNFPLG DYKPDSKTITEYDPSTGNKTKTIKETIKTIYYDNSQTIKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRTKE FQYRPDGTIKTQKTYYDSGKLCEISNYDTKDYTLFKRNGRIWDEYRLSTTQPDAPPQIPLPYNIEHTPSPHQKFNPEAIY FDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQKYTIEDLLKLSNGARNVYLF SFNTQKEEINITFPDSLDPQEAITTWKQENSQTHHQGITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDKIY HITCTNTKQMTKILEEYHNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDEQPC NWWYNIFSHFYTTQSPPPKTTELMTE >Mature_505_residues AHQTAIKDRFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVDIKLGCYKAFPNDDAFLNFPLGD YKPDSKTITEYDPSTGNKTKTIKETIKTIYYDNSQTIKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRTKEF QYRPDGTIKTQKTYYDSGKLCEISNYDTKDYTLFKRNGRIWDEYRLSTTQPDAPPQIPLPYNIEHTPSPHQKFNPEAIYF DDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQKYTIEDLLKLSNGARNVYLFS FNTQKEEINITFPDSLDPQEAITTWKQENSQTHHQGITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDKIYH ITCTNTKQMTKILEEYHNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDEQPCN WWYNIFSHFYTTQSPPPKTTELMTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59193; Mature: 59062
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHQTAIKDRFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVDI CCCCCCCCCEEEEEECCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE KLGCYKAFPNDDAFLNFPLGDYKPDSKTITEYDPSTGNKTKTIKETIKTIYYDNSQTIKE EEEEEECCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEECCHHHHHH IIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRTKEFQYRPDGTIKTQKTYYDSGK HHHHCCCEEECCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCC LCEISNYDTKDYTLFKRNGRIWDEYRLSTTQPDAPPQIPLPYNIEHTPSPHQKFNPEAIY EEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE FDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQ EECCCEECCCCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC KYTIEDLLKLSNGARNVYLFSFNTQKEEINITFPDSLDPQEAITTWKQENSQTHHQGITQ CCCHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHH IIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDKIYHITCTNTKQMTKILEEYHNK HHHCCCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHH YVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDEQPC HHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCC NWWYNIFSHFYTTQSPPPKTTELMTE HHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure AHQTAIKDRFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVDI CCCCCCCCEEEEEECCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE KLGCYKAFPNDDAFLNFPLGDYKPDSKTITEYDPSTGNKTKTIKETIKTIYYDNSQTIKE EEEEEECCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEECCHHHHHH IIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRTKEFQYRPDGTIKTQKTYYDSGK HHHHCCCEEECCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCC LCEISNYDTKDYTLFKRNGRIWDEYRLSTTQPDAPPQIPLPYNIEHTPSPHQKFNPEAIY EEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE FDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQ EECCCEECCCCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC KYTIEDLLKLSNGARNVYLFSFNTQKEEINITFPDSLDPQEAITTWKQENSQTHHQGITQ CCCHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHH IIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDKIYHITCTNTKQMTKILEEYHNK HHHCCCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHH YVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDEQPC HHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCC NWWYNIFSHFYTTQSPPPKTTELMTE HHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA