| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is engC
Identifier: 197294430
GI number: 197294430
Start: 363311
End: 364243
Strand: Reverse
Name: engC
Synonym: PAa_0348
Alternate gene names: 197294430
Gene position: 364243-363311 (Counterclockwise)
Preceding gene: 197294431
Following gene: 197294429
Centisome position: 41.39
GC content: 26.26
Gene sequence:
>933_bases TTGAAAAAAGCCTTAGTTATCAGATTTTTAGCAGGTATTTATTATATTCAAGATCTTGACAATCAAACTATTTTAAAAGC TCAAAAAAAAGGGGTTTTAAAAAAATCTAATTTCATACAGGATAATCAATTAAAAAATAATCGTGATAAAATGAGCATTA AAGTAGGGGATATTGTTCTTTATGGAATGTGTTATGATAAATATTTAATTTATGCTATTTTGCCCCGTAAAAATGAATTA AAAAGACCTAATATTGCAAACATTGACCAAGTATTATTGGTTTTTTCTTTGGTAAAACCCCATTTCCAAACACTTCTTTT AGATAAATTTTTGTTAATTTTACAACAACATAAATTAGATGTCATCTTAGTTTTTTCTAAAATAGATTTAATAGAAAAAG AAGAATTAGAAGAAATTCAACAAAACATGAATTATTACTTTCCTTTTTACACTTGTTATTATGTTGATTCCAAACAACAA ATAGGGATTGGTGTTTTAAAAAATATTTTTGAACAAAAAATCACTGTTTTAGCTGGACAAACGGGAGTTGGCAAGTCAAC TTTACTAAAAGCTTTGATTCCTGATGCAAATTTAAAAACCCAAGAAATTTCTGAAAGTTTAGGTAGAGGAAAACACACTA CCAAAAATGCTCAATTATATCTTTTCAACAACGGGTTTATCGCTGATACTCCTGGTTTTTCTAAATTAGATTTAGGTGGC TTTTCTTATCAAAATTTAAAAAATTTTTATCCTGATTTTTTAAAATATGTTGATAATTGTTATTTTGGCACAAATTGCCT TCATTTGCAAGAAACCCAATGTGGCGTTAAAGAGGCTTTGACACAAGGAAAAATTATTCCTTCGCGATATTCTAATTATT GTTATTTCATGGAAGAAATTAAAAAAGAGAAAAAAATATATGTTAAAAATTAA
Upstream 100 bases:
>100_bases AAAATGTTTATATGTTATAATAATAATAATTAGTGATTTTTAAAAATGCAAAAATAATCTGTTAAAAGATTTTAATAGAA ATAGAAATAGAGGATGTAGT
Downstream 100 bases:
>100_bases TATAATTTAACATCAACAACTTAAAAGACGATAGTTTTGATAATTTATATTAAATACATGTTTTTGTTTTCCTTATTTAA TTTATTAGTTTTCAAATTTT
Product: GTPase EngC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKKALVIRFLAGIYYIQDLDNQTILKAQKKGVLKKSNFIQDNQLKNNRDKMSIKVGDIVLYGMCYDKYLIYAILPRKNEL KRPNIANIDQVLLVFSLVKPHFQTLLLDKFLLILQQHKLDVILVFSKIDLIEKEELEEIQQNMNYYFPFYTCYYVDSKQQ IGIGVLKNIFEQKITVLAGQTGVGKSTLLKALIPDANLKTQEISESLGRGKHTTKNAQLYLFNNGFIADTPGFSKLDLGG FSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQGKIIPSRYSNYCYFMEEIKKEKKIYVKN
Sequences:
>Translated_310_residues MKKALVIRFLAGIYYIQDLDNQTILKAQKKGVLKKSNFIQDNQLKNNRDKMSIKVGDIVLYGMCYDKYLIYAILPRKNEL KRPNIANIDQVLLVFSLVKPHFQTLLLDKFLLILQQHKLDVILVFSKIDLIEKEELEEIQQNMNYYFPFYTCYYVDSKQQ IGIGVLKNIFEQKITVLAGQTGVGKSTLLKALIPDANLKTQEISESLGRGKHTTKNAQLYLFNNGFIADTPGFSKLDLGG FSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQGKIIPSRYSNYCYFMEEIKKEKKIYVKN >Mature_310_residues MKKALVIRFLAGIYYIQDLDNQTILKAQKKGVLKKSNFIQDNQLKNNRDKMSIKVGDIVLYGMCYDKYLIYAILPRKNEL KRPNIANIDQVLLVFSLVKPHFQTLLLDKFLLILQQHKLDVILVFSKIDLIEKEELEEIQQNMNYYFPFYTCYYVDSKQQ IGIGVLKNIFEQKITVLAGQTGVGKSTLLKALIPDANLKTQEISESLGRGKHTTKNAQLYLFNNGFIADTPGFSKLDLGG FSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQGKIIPSRYSNYCYFMEEIKKEKKIYVKN
Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover
COG id: COG1162
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 engC GTPase domain
Homologues:
Organism=Escherichia coli, GI87082381, Length=249, Percent_Identity=30.9236947791165, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RSGA_PHYAS (B1V9R1)
Other databases:
- EMBL: AM422018 - RefSeq: YP_001798971.1 - ProteinModelPortal: B1V9R1 - SMR: B1V9R1 - GeneID: 6799024 - GenomeReviews: AM422018_GR - HOGENOM: HBG652450 - OMA: TRARGVF - HAMAP: MF_01820 - InterPro: IPR010914 - InterPro: IPR016027 - InterPro: IPR004881 - TIGRFAMs: TIGR00157
Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB
EC number: NA
Molecular weight: Translated: 35894; Mature: 35894
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50936 ENGC_GTPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKALVIRFLAGIYYIQDLDNQTILKAQKKGVLKKSNFIQDNQLKNNRDKMSIKVGDIVL CCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCEEE YGMCYDKYLIYAILPRKNELKRPNIANIDQVLLVFSLVKPHFQTLLLDKFLLILQQHKLD EEHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VILVFSKIDLIEKEELEEIQQNMNYYFPFYTCYYVDSKQQIGIGVLKNIFEQKITVLAGQ EEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHEECC TGVGKSTLLKALIPDANLKTQEISESLGRGKHTTKNAQLYLFNNGFIADTPGFSKLDLGG CCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCEEECCC FSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQGKIIPSRYSNYCYFMEEI CCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHCCHHHHHHCCCCCHHHHCCHHHHHHHH KKEKKIYVKN HHCCCEEECC >Mature Secondary Structure MKKALVIRFLAGIYYIQDLDNQTILKAQKKGVLKKSNFIQDNQLKNNRDKMSIKVGDIVL CCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCEEE YGMCYDKYLIYAILPRKNELKRPNIANIDQVLLVFSLVKPHFQTLLLDKFLLILQQHKLD EEHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VILVFSKIDLIEKEELEEIQQNMNYYFPFYTCYYVDSKQQIGIGVLKNIFEQKITVLAGQ EEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHEECC TGVGKSTLLKALIPDANLKTQEISESLGRGKHTTKNAQLYLFNNGFIADTPGFSKLDLGG CCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCEEECCC FSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQGKIIPSRYSNYCYFMEEI CCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHCCHHHHHHCCCCCHHHHCCHHHHHHHH KKEKKIYVKN HHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA