| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294425
Identifier: 197294425
GI number: 197294425
Start: 355299
End: 355496
Strand: Direct
Name: 197294425
Synonym: PAa_0343
Alternate gene names: NA
Gene position: 355299-355496 (Clockwise)
Preceding gene: 197294424
Following gene: 197294426
Centisome position: 40.38
GC content: 29.8
Gene sequence:
>198_bases GTGCCAATTCCTGGGATTAAACAACATGTAGCAGCAAGTAAACCACCACCACCAACCCATAAAACTTTTGATGCAATAGC AGAATATTCGGGGTCTATTCCTGCATTTTCTAAAGCTTTTTTGGTTTTGTCATCTAGTTCTTTAAATCAATTATTTTTTA GATTATTATGTAAAAAAATTATTTTTTTATATTTTTAG
Upstream 100 bases:
>100_bases TGGAGATGCGTTTTTTGGTGGTTCTTGATTGGTTTTTTCGGTAAGTGTAATAGTTGCTACATAAGCGATAGTACTTATTA AAACTGCTACTCCTAAGAAT
Downstream 100 bases:
>100_bases TATTGACAAATAATTTTAATTATGTTATAATAAAAGTAATTAATAAACAATTTGGTTTTTCAGAAAATCATATTTTTTTT GGAAAAAAATGTTGTTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MPIPGIKQHVAASKPPPPTHKTFDAIAEYSGSIPAFSKAFLVLSSSSLNQLFFRLLCKKIIFLYF
Sequences:
>Translated_65_residues MPIPGIKQHVAASKPPPPTHKTFDAIAEYSGSIPAFSKAFLVLSSSSLNQLFFRLLCKKIIFLYF >Mature_64_residues PIPGIKQHVAASKPPPPTHKTFDAIAEYSGSIPAFSKAFLVLSSSSLNQLFFRLLCKKIIFLYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7212; Mature: 7080
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPGIKQHVAASKPPPPTHKTFDAIAEYSGSIPAFSKAFLVLSSSSLNQLFFRLLCKKI CCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH IFLYF HHHCC >Mature Secondary Structure PIPGIKQHVAASKPPPPTHKTFDAIAEYSGSIPAFSKAFLVLSSSSLNQLFFRLLCKKI CCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH IFLYF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA