| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294410
Identifier: 197294410
GI number: 197294410
Start: 344878
End: 345510
Strand: Reverse
Name: 197294410
Synonym: PAa_0325
Alternate gene names: NA
Gene position: 345510-344878 (Counterclockwise)
Preceding gene: 197294411
Following gene: 197294409
Centisome position: 39.26
GC content: 25.59
Gene sequence:
>633_bases ATGAAACAAATATCTAATTTAGATTTTAATAATATTAACGTTTTTAATCATAAATCTTTGTGCGTTAACATAACCAAACA AATAGTTCAACCAATTTTTTTCAATAAAGCTTTTAATCAGTATATGTTTGATTGCCATAATATACTCAATGAATATTTAA CCAACAACCAACACAACTCTCAAAGCCAAAAATCAATTCGTGGTAAAATTAACGAATACTTAATTTTGCTTTATCTAAAT CACAAAGGAATTAAGTATTTATACCCTCAATCATATTTATTTTTCATCCCTGATATTAAATTTGATTTAGTATTGTTTAC TAAAAGAAAACGAATTATTGCCTTCAATTTCAAAACTTGCCTTAGAGATAGATACAAACAATCAATAGTAGAAGGGGAAC AAATCAAAAAACTAGACACTCGCTTTGAGTTTTATTTGTTAACAAATGATGAATCCGAAACTCAAAGATTAAATAATAAA ATTAAAAATGGTAAAGTACAATCAATTAACAAAACTCTCAATTTATTTTCCAATTCAGCTAATCTCTTCTTACAAAACTT ACTAACCAACCAATTCATTCCCTTTTCACCTATTAATTTAATTAAAAAGATGGTTCGCCCTAATGACAAATAA
Upstream 100 bases:
>100_bases AAAAACCGTAGCGGTCAATTAGGTGAATGTAGTTTTAATTTTTATAAACAAATCCAAAGATTTGAAGCAAAAGAATAAGA ATAAAAAAGGAAATAAAAAT
Downstream 100 bases:
>100_bases ATTAATTAGTTTTGAAGGTATTGACGGAAGTGGCAAAACTACTTTAATTAACGAATTAAAAGCTTTTTTTGAAAATAAAG GCTATAAAACCAAAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQHNSQSQKSIRGKINEYLILLYLN HKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTCLRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNK IKNGKVQSINKTLNLFSNSANLFLQNLLTNQFIPFSPINLIKKMVRPNDK
Sequences:
>Translated_210_residues MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQHNSQSQKSIRGKINEYLILLYLN HKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTCLRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNK IKNGKVQSINKTLNLFSNSANLFLQNLLTNQFIPFSPINLIKKMVRPNDK >Mature_210_residues MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQHNSQSQKSIRGKINEYLILLYLN HKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTCLRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNK IKNGKVQSINKTLNLFSNSANLFLQNLLTNQFIPFSPINLIKKMVRPNDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25035; Mature: 25035
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQHNS CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QSQKSIRGKINEYLILLYLNHKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTC HHHHHHHHCCCEEEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEECHHHH LRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNKIKNGKVQSINKTLNLFSNSA HHHHHHHHHHCHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHH NLFLQNLLTNQFIPFSPINLIKKMVRPNDK HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQHNS CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QSQKSIRGKINEYLILLYLNHKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTC HHHHHHHHCCCEEEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEECHHHH LRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNKIKNGKVQSINKTLNLFSNSA HHHHHHHHHHCHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHH NLFLQNLLTNQFIPFSPINLIKKMVRPNDK HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA