| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294395
Identifier: 197294395
GI number: 197294395
Start: 332026
End: 333555
Strand: Reverse
Name: 197294395
Synonym: PAa_0305
Alternate gene names: NA
Gene position: 333555-332026 (Counterclockwise)
Preceding gene: 197294396
Following gene: 197294394
Centisome position: 37.91
GC content: 38.04
Gene sequence:
>1530_bases TTGGCACACCAAACAGCCATCAAAGATGGGTTTATTTTTTGGGACGCAAACAAACACCCTCAAGAAATAAAATGCAACAC TCACTTAATCTCCATCAAACTCCCTGAAGGCCGAAGCAAAACAGAAGCAATTAAAAATTACTTAACTGCCCACAACATCA CCAAAAACCCTGTATACATTAAGTTAGGATGTTACAACGCATTTCCAAATGACGACGCATTCTTAAATTTTCCCCTAGGA GACTACAAACCTGACTCAAAAACAATAACTGAATACAACCCCAAATCAAAAGGTTCCACCAACTCCACACAAACAATCAA AGAAACCACACAAACAATTTACTACGACAACAGTCAAACAATTAAAGAAATTATCCAATACACCCCAGATATCCACATAG GAAAAAGAACAAAACATGTCCTTTATCATCCTGATGGCTCACTTGATTTCGTTACCATATATAACTCTGACGGTAACCGA ACGAAAGAATTTCAATACAGACCAGACGGCACAATTAAAACGCAAAAAACATATTACGACTCAGGGAAATTATGTGAAAT ATCTAACTATGATACAAAAGATTACACTTTATTTAAACGAAATGGTAGAATTTGGGACGAATATCACCTATCGACAACCC AACCAGATGCCCCTCCTCAAATCCCGCTTCCCTACAATATCGAACACACACCATCCCCTCACCAAAAATTCAATCTAGAA GCGATTTATTTCGACGACGGAATCCGCTTCCTCCCTTCAGAATCTCCAGAAGTAGAACGCTTAAAAAAAGACCTAACACG CCTTCAATACGAAGTTGAAGTCGATGAAGCACAAAACAATTCTCGTGAAACAATCAACCAAAAATTAAAAACCATTCGCG AGCTGAAACAGCGAATAATCACTTCCCAAAAATACACTATCGAAGACTTACTCAAACTATCAAACGGAGCTAGAAATGTT TATCTTTTCTCATTCAACACCCAAAAAGAAGAAATAAACATCACCTTTCCTGATTCCCTAGACCCTCAAGAAGCCATCAA AACCTGGAAACAAGAGAACTCACAAACCCATCATCAAGGCATCACACAAATCATCAAAATTCCCAAATATACTTCAATAA CTTTAGGTCCGCCCATAAACAAAGTGATAAAACACGACGCAAACCTTACAACCATTCATCATACTTTTGAAACCACCGAC AAAATATATCACATCACCTGCACCAACACAAAACAAATAACAAAAATCCTAGAGGAATACCACAATAAATATGTTTCTTG GTTACAACAATGCTACATCAAACCAGGTGTTCGTTATACACTTGGCGACATAAAACATCATTTCGGTTATCGTCCAACAG ACATCTATAACGAAGACGGAACAAAATCCAACTTCACTTGTAGCGGCAGTGGATGGCGAGCAGTATGGTACGTAGACGAA CAACCATGCAATTGGTGGTATAATATCTTTTCACATTTCTACACAACACAATCCCCACCACCAAAACCCACTGAACTAAT GACAGAATAA
Upstream 100 bases:
>100_bases GCCACCAGATGGTTTATTAGCGGTTTATTTAAGAGCAAGAGATAATCCTTTTAATACTCAATACCCTCAAGCTGATAACG AATCCACCTTAGAAGAGCTT
Downstream 100 bases:
>100_bases CGCTAAAGACCTTCTCGCGAAGGTCTTTTTTCATTTAAAAATTAAATTAAGGAGAAAAAAAATGAAAATAATAATTTTTG AAGGCTTAGACGGAAGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MAHQTAIKDGFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVYIKLGCYNAFPNDDAFLNFPLG DYKPDSKTITEYNPKSKGSTNSTQTIKETTQTIYYDNSQTIKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNR TKEFQYRPDGTIKTQKTYYDSGKLCEISNYDTKDYTLFKRNGRIWDEYHLSTTQPDAPPQIPLPYNIEHTPSPHQKFNLE AIYFDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQKYTIEDLLKLSNGARNV YLFSFNTQKEEINITFPDSLDPQEAIKTWKQENSQTHHQGITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTD KIYHITCTNTKQITKILEEYHNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDE QPCNWWYNIFSHFYTTQSPPPKPTELMTE
Sequences:
>Translated_509_residues MAHQTAIKDGFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVYIKLGCYNAFPNDDAFLNFPLG DYKPDSKTITEYNPKSKGSTNSTQTIKETTQTIYYDNSQTIKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNR TKEFQYRPDGTIKTQKTYYDSGKLCEISNYDTKDYTLFKRNGRIWDEYHLSTTQPDAPPQIPLPYNIEHTPSPHQKFNLE AIYFDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQKYTIEDLLKLSNGARNV YLFSFNTQKEEINITFPDSLDPQEAIKTWKQENSQTHHQGITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTD KIYHITCTNTKQITKILEEYHNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDE QPCNWWYNIFSHFYTTQSPPPKPTELMTE >Mature_508_residues AHQTAIKDGFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVYIKLGCYNAFPNDDAFLNFPLGD YKPDSKTITEYNPKSKGSTNSTQTIKETTQTIYYDNSQTIKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRT KEFQYRPDGTIKTQKTYYDSGKLCEISNYDTKDYTLFKRNGRIWDEYHLSTTQPDAPPQIPLPYNIEHTPSPHQKFNLEA IYFDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRIITSQKYTIEDLLKLSNGARNVY LFSFNTQKEEINITFPDSLDPQEAIKTWKQENSQTHHQGITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDK IYHITCTNTKQITKILEEYHNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDEQ PCNWWYNIFSHFYTTQSPPPKPTELMTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59419; Mature: 59288
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHQTAIKDGFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVYI CCCCCCCCCCEEEECCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE KLGCYNAFPNDDAFLNFPLGDYKPDSKTITEYNPKSKGSTNSTQTIKETTQTIYYDNSQT EEEEECCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCEEEECCHHH IKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRTKEFQYRPDGTIKTQKTYYD HHHHHHHCCCEEECCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEECC SGKLCEISNYDTKDYTLFKRNGRIWDEYHLSTTQPDAPPQIPLPYNIEHTPSPHQKFNLE CCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE AIYFDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRII EEEEECCEEECCCCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH TSQKYTIEDLLKLSNGARNVYLFSFNTQKEEINITFPDSLDPQEAIKTWKQENSQTHHQG CCCCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHH ITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDKIYHITCTNTKQITKILEEY HHHHHHCCCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCEEEEEEECCHHHHHHHHHHH HNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDE HHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECC QPCNWWYNIFSHFYTTQSPPPKPTELMTE CCCHHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure AHQTAIKDGFIFWDANKHPQEIKCNTHLISIKLPEGRSKTEAIKNYLTAHNITKNPVYI CCCCCCCCCEEEECCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE KLGCYNAFPNDDAFLNFPLGDYKPDSKTITEYNPKSKGSTNSTQTIKETTQTIYYDNSQT EEEEECCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCEEEECCHHH IKEIIQYTPDIHIGKRTKHVLYHPDGSLDFVTIYNSDGNRTKEFQYRPDGTIKTQKTYYD HHHHHHHCCCEEECCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEECC SGKLCEISNYDTKDYTLFKRNGRIWDEYHLSTTQPDAPPQIPLPYNIEHTPSPHQKFNLE CCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE AIYFDDGIRFLPSESPEVERLKKDLTRLQYEVEVDEAQNNSRETINQKLKTIRELKQRII EEEEECCEEECCCCCCHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH TSQKYTIEDLLKLSNGARNVYLFSFNTQKEEINITFPDSLDPQEAIKTWKQENSQTHHQG CCCCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHH ITQIIKIPKYTSITLGPPINKVIKHDANLTTIHHTFETTDKIYHITCTNTKQITKILEEY HHHHHHCCCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCEEEEEEECCHHHHHHHHHHH HNKYVSWLQQCYIKPGVRYTLGDIKHHFGYRPTDIYNEDGTKSNFTCSGSGWRAVWYVDE HHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECC QPCNWWYNIFSHFYTTQSPPPKPTELMTE CCCHHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA