| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is plsY
Identifier: 197294377
GI number: 197294377
Start: 295383
End: 296060
Strand: Reverse
Name: plsY
Synonym: PAa_0266
Alternate gene names: 197294377
Gene position: 296060-295383 (Counterclockwise)
Preceding gene: 197294378
Following gene: 197294375
Centisome position: 33.64
GC content: 27.88
Gene sequence:
>678_bases ATGGTTTCAATATATTTTTTCTTTTTTTTTCTTTTGTTTTATGCTTTAGGATCTTTTCCAACTGGTTTAATAATTGGTAA ATTAACTCAAAAAAAAGATTTACGTTTGGTGGGATCTCGTAATGTAGGAGCAACTAATGCTTCAAGAATTTTGGGATTTA AATGGGGAATTGTAGTTTTTTTATTTGATTTTGCTAAAGGACTTGTCCCTGCTATTATTTGTCTACGATTTAAAAACTTT AAGGATTTAATATTTATTAACGGTTGTGACAATCGTTATAAAGATATAGCTATTTGTCTTTTGGTGATTTTGCCTATTTT CGGTCATATGTTTTCTATCTTTAATAAATTTAAAGGCGGTAAAGCAATTGCAACTTCAGTTGGAGTTATTACTGCGATTA ATCCTTTCATTGGTTTATTGGGGATTCTTTTTTTCGTTCTTCTTTTCATTTTTGTGGGTTATGCTTCTTTAGCCTCAATT ATGGCAACTCTTTTGGTTGATTTATTGCTTTTTTTCATCAATCATCATCCTGGCATAACAAATATATCTCAAAATCAAAT ATTATACTTTTTTATTGGTTTATCAACTTGCTTTATTATTTTAAAACATCATTCCAATATCATCCGTCTTTGGCAAGGAA AAGAATATAAATTCTCTTTTATCAAAAAAAGAAAATAA
Upstream 100 bases:
>100_bases ATCAATTATGTTTTGATTATGTTTTGTTTTCCAAAACTGATATGATAAAATGGTTGCGATTTTTTTAACTTACAAAATAA ATAGATAAGGATTTTTTATA
Downstream 100 bases:
>100_bases TAATTTTAATTTTCAAGTTGAAATTTTAATCAACTAGTTTGCTCCGTTAAAAATTTCTAATTACCAACAAATAAATAATT TTTTATGAAAAACCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVFLFDFAKGLVPAIICLRFKNF KDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGGKAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASI MATLLVDLLLFFINHHPGITNISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK
Sequences:
>Translated_225_residues MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVFLFDFAKGLVPAIICLRFKNF KDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGGKAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASI MATLLVDLLLFFINHHPGITNISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK >Mature_225_residues MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVFLFDFAKGLVPAIICLRFKNF KDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGGKAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASI MATLLVDLLLFFINHHPGITNISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=219, Percent_Identity=28.7671232876712, Blast_Score=89, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_PHYAS (B1V9H9)
Other databases:
- EMBL: AM422018 - RefSeq: YP_001798918.1 - GeneID: 6799235 - GenomeReviews: AM422018_GR - HOGENOM: HBG734487 - OMA: VLGWKAG - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 25505; Mature: 25505
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12157d40)-; HASH(0x1239ea10)-; HASH(0x11ac369c)-; HASH(0x12b07dc0)-; HASH(0x12769bdc)-; HASH(0x121679f4)-;
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVF CCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH LFDFAKGLVPAIICLRFKNFKDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGG HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASIMATLLVDLLLFFINHHPGIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK CCCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCH >Mature Secondary Structure MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVF CCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH LFDFAKGLVPAIICLRFKNFKDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGG HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASIMATLLVDLLLFFINHHPGIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK CCCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA