Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is plsY

Identifier: 197294377

GI number: 197294377

Start: 295383

End: 296060

Strand: Reverse

Name: plsY

Synonym: PAa_0266

Alternate gene names: 197294377

Gene position: 296060-295383 (Counterclockwise)

Preceding gene: 197294378

Following gene: 197294375

Centisome position: 33.64

GC content: 27.88

Gene sequence:

>678_bases
ATGGTTTCAATATATTTTTTCTTTTTTTTTCTTTTGTTTTATGCTTTAGGATCTTTTCCAACTGGTTTAATAATTGGTAA
ATTAACTCAAAAAAAAGATTTACGTTTGGTGGGATCTCGTAATGTAGGAGCAACTAATGCTTCAAGAATTTTGGGATTTA
AATGGGGAATTGTAGTTTTTTTATTTGATTTTGCTAAAGGACTTGTCCCTGCTATTATTTGTCTACGATTTAAAAACTTT
AAGGATTTAATATTTATTAACGGTTGTGACAATCGTTATAAAGATATAGCTATTTGTCTTTTGGTGATTTTGCCTATTTT
CGGTCATATGTTTTCTATCTTTAATAAATTTAAAGGCGGTAAAGCAATTGCAACTTCAGTTGGAGTTATTACTGCGATTA
ATCCTTTCATTGGTTTATTGGGGATTCTTTTTTTCGTTCTTCTTTTCATTTTTGTGGGTTATGCTTCTTTAGCCTCAATT
ATGGCAACTCTTTTGGTTGATTTATTGCTTTTTTTCATCAATCATCATCCTGGCATAACAAATATATCTCAAAATCAAAT
ATTATACTTTTTTATTGGTTTATCAACTTGCTTTATTATTTTAAAACATCATTCCAATATCATCCGTCTTTGGCAAGGAA
AAGAATATAAATTCTCTTTTATCAAAAAAAGAAAATAA

Upstream 100 bases:

>100_bases
ATCAATTATGTTTTGATTATGTTTTGTTTTCCAAAACTGATATGATAAAATGGTTGCGATTTTTTTAACTTACAAAATAA
ATAGATAAGGATTTTTTATA

Downstream 100 bases:

>100_bases
TAATTTTAATTTTCAAGTTGAAATTTTAATCAACTAGTTTGCTCCGTTAAAAATTTCTAATTACCAACAAATAAATAATT
TTTTATGAAAAACCTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVFLFDFAKGLVPAIICLRFKNF
KDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGGKAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASI
MATLLVDLLLFFINHHPGITNISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK

Sequences:

>Translated_225_residues
MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVFLFDFAKGLVPAIICLRFKNF
KDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGGKAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASI
MATLLVDLLLFFINHHPGITNISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK
>Mature_225_residues
MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVFLFDFAKGLVPAIICLRFKNF
KDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGGKAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASI
MATLLVDLLLFFINHHPGITNISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK

Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP

COG id: COG0344

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plsY family

Homologues:

Organism=Escherichia coli, GI1789439, Length=219, Percent_Identity=28.7671232876712, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PLSY_PHYAS (B1V9H9)

Other databases:

- EMBL:   AM422018
- RefSeq:   YP_001798918.1
- GeneID:   6799235
- GenomeReviews:   AM422018_GR
- HOGENOM:   HBG734487
- OMA:   VLGWKAG
- HAMAP:   MF_01043
- InterPro:   IPR003811
- TIGRFAMs:   TIGR00023

Pfam domain/function: PF02660 DUF205

EC number: NA

Molecular weight: Translated: 25505; Mature: 25505

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12157d40)-; HASH(0x1239ea10)-; HASH(0x11ac369c)-; HASH(0x12b07dc0)-; HASH(0x12769bdc)-; HASH(0x121679f4)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVF
CCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
LFDFAKGLVPAIICLRFKNFKDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGG
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASIMATLLVDLLLFFINHHPGIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK
CCCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCH
>Mature Secondary Structure
MVSIYFFFFFLLFYALGSFPTGLIIGKLTQKKDLRLVGSRNVGATNASRILGFKWGIVVF
CCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
LFDFAKGLVPAIICLRFKNFKDLIFINGCDNRYKDIAICLLVILPIFGHMFSIFNKFKGG
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KAIATSVGVITAINPFIGLLGILFFVLLFIFVGYASLASIMATLLVDLLLFFINHHPGIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NISQNQILYFFIGLSTCFIILKHHSNIIRLWQGKEYKFSFIKKRK
CCCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA