| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294369
Identifier: 197294369
GI number: 197294369
Start: 283383
End: 283934
Strand: Reverse
Name: 197294369
Synonym: PAa_0249
Alternate gene names: NA
Gene position: 283934-283383 (Counterclockwise)
Preceding gene: 197294370
Following gene: 197294368
Centisome position: 32.27
GC content: 28.62
Gene sequence:
>552_bases ATGAATTATCAAAAAACTTTTTATCGCAAAGGAATCAAAACAGCTATAAAATTTGTTGCTGAATATAGCCCAGATGGTAA ATTAACCAAACAAACCCAATACTATTCCGATGGCAAAACAATTTATGTCATCCAAGAATACAACCCAACCACAGGCGCAA AAGTTAAAAGGACTGCATACCATCACGACGATGGCAGAAAAAAGAAATTTGTTGTTGAATATTATCCAGATGGTAAATTA AATAAAGCAATCTGGTTCCATAAAGATGGTAAAACAATTCACTGTATTATTGAATATAACCCTAAAACTGCAGAAATAAT CAAAACAATCAATTATCATTTTGATGGCAAAATTGGAGAAGAAATAATAAATGATAAAAAGCACATCATAAATTACTATC AAGATGATTTTAAAACGTTAATTTATACTAATGAATATAACCTTAAAACAGGTAAATTAATCAAAAATACCCAATGCAAC CCAGATGGAACTGTTTTCAATGAAATCTATTACAACCCTAATGGAAGTATAAAAACAACAAAAAAATATTAA
Upstream 100 bases:
>100_bases GGAATAACACAAGAAGTTATTATTAAAAATTATTAAAAAGAACAAATAATGAAAATTTTAATCAACAAACAAATATTTTA ATTAAAGGAGCATAAATAAT
Downstream 100 bases:
>100_bases TAATTCATAAAAAAATTTAGCCCAAATAATGAAAATTTTAATCAACAAATAAATATTTTAATTAAAGGAGAAAAATAATT ATGAATCATCAAAAAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNYQKTFYRKGIKTAIKFVAEYSPDGKLTKQTQYYSDGKTIYVIQEYNPTTGAKVKRTAYHHDDGRKKKFVVEYYPDGKL NKAIWFHKDGKTIHCIIEYNPKTAEIIKTINYHFDGKIGEEIINDKKHIINYYQDDFKTLIYTNEYNLKTGKLIKNTQCN PDGTVFNEIYYNPNGSIKTTKKY
Sequences:
>Translated_183_residues MNYQKTFYRKGIKTAIKFVAEYSPDGKLTKQTQYYSDGKTIYVIQEYNPTTGAKVKRTAYHHDDGRKKKFVVEYYPDGKL NKAIWFHKDGKTIHCIIEYNPKTAEIIKTINYHFDGKIGEEIINDKKHIINYYQDDFKTLIYTNEYNLKTGKLIKNTQCN PDGTVFNEIYYNPNGSIKTTKKY >Mature_183_residues MNYQKTFYRKGIKTAIKFVAEYSPDGKLTKQTQYYSDGKTIYVIQEYNPTTGAKVKRTAYHHDDGRKKKFVVEYYPDGKL NKAIWFHKDGKTIHCIIEYNPKTAEIIKTINYHFDGKIGEEIINDKKHIINYYQDDFKTLIYTNEYNLKTGKLIKNTQCN PDGTVFNEIYYNPNGSIKTTKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21546; Mature: 21546
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQKTFYRKGIKTAIKFVAEYSPDGKLTKQTQYYSDGKTIYVIQEYNPTTGAKVKRTAY CCCHHHHHHHHHHHHHHHHHHCCCCCCEEECEEEECCCCEEEEEEECCCCCCCEEEEEEE HHDDGRKKKFVVEYYPDGKLNKAIWFHKDGKTIHCIIEYNPKTAEIIKTINYHFDGKIGE ECCCCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCHHHHHEECCEEECCCHHH EIINDKKHIINYYQDDFKTLIYTNEYNLKTGKLIKNTQCNPDGTVFNEIYYNPNGSIKTT HHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEC KKY CCC >Mature Secondary Structure MNYQKTFYRKGIKTAIKFVAEYSPDGKLTKQTQYYSDGKTIYVIQEYNPTTGAKVKRTAY CCCHHHHHHHHHHHHHHHHHHCCCCCCEEECEEEECCCCEEEEEEECCCCCCCEEEEEEE HHDDGRKKKFVVEYYPDGKLNKAIWFHKDGKTIHCIIEYNPKTAEIIKTINYHFDGKIGE ECCCCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCHHHHHEECCEEECCCHHH EIINDKKHIINYYQDDFKTLIYTNEYNLKTGKLIKNTQCNPDGTVFNEIYYNPNGSIKTT HHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEC KKY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA