| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294354
Identifier: 197294354
GI number: 197294354
Start: 268799
End: 269260
Strand: Direct
Name: 197294354
Synonym: PAa_0229
Alternate gene names: NA
Gene position: 268799-269260 (Clockwise)
Preceding gene: 197294353
Following gene: 197294355
Centisome position: 30.55
GC content: 28.79
Gene sequence:
>462_bases ATGAATTATCAAAAAACTTTTTATTACCTTGATGGCAAAACAAAGAAATCTGTTGTTGAATACTACTCAGATGGGGAAAC AATATATTACATCACTGAATATCACCCTGAAACAGAAGAAGTAATTAAACAAACAAATTATAATTCTGATGGTAAATTAA CCACAGAAATTTTTTATGATGGCGATGGCAAAACAATTTATGTCATCCAAGAATACAACCCCCAAATAAGTAAATTAATT AAATTTACTAAATACCGAGAAGATGGTGAAACAATTGACTATATTACAGAATTTAAGTACCATCCCAAAACAAACAAATT AATTAAAACAACTGGTTTTTCCTTCGATCGCAAAAGAATAGCTTTTATATACAAACACCATCCTAATGGTAAATTGTTTA AAAGAACTTACTACAACTCCGATGGAACAATCATAAAAGAAAGGAGCAAAAACAATGACTAA
Upstream 100 bases:
>100_bases AAACAACAAAAAAATATTAATTATTCATAAAAAAATTTAGAACAAATAATTAAAACTTTAATCAATAAAAAAATATTTTA ATTAAAGGAGAAAAATAATT
Downstream 100 bases:
>100_bases AAAAGAATTAATTAAAAACATCGCAGTAATGAATAACACTTCGGTTACTCAAACTCAAGATTTTTACAATTCGTTTGAAA ATGCTTTAATTGAAGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPETEEVIKQTNYNSDGKLTTEIFYDGDGKTIYVIQEYNPQISKLI KFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRIAFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND
Sequences:
>Translated_153_residues MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPETEEVIKQTNYNSDGKLTTEIFYDGDGKTIYVIQEYNPQISKLI KFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRIAFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND >Mature_153_residues MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPETEEVIKQTNYNSDGKLTTEIFYDGDGKTIYVIQEYNPQISKLI KFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRIAFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18358; Mature: 18358
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPETEEVIKQTNYNSDGKLTTEIFYD CCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEEC GDGKTIYVIQEYNPQISKLIKFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRI CCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCEE AFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND EEEEEECCCCCEEEEEEECCCCCEEECCCCCCC >Mature Secondary Structure MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPETEEVIKQTNYNSDGKLTTEIFYD CCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEEC GDGKTIYVIQEYNPQISKLIKFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRI CCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCEE AFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND EEEEEECCCCCEEEEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA