| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294342
Identifier: 197294342
GI number: 197294342
Start: 256358
End: 257008
Strand: Reverse
Name: 197294342
Synonym: PAa_0217
Alternate gene names: NA
Gene position: 257008-256358 (Counterclockwise)
Preceding gene: 197294344
Following gene: 197294337
Centisome position: 29.21
GC content: 25.5
Gene sequence:
>651_bases ATGAATAATAACTCAAAAAGGAAAAAAATATGCTTCATTGCCCTTTTCCTTTTAGTCTTGATAACAAGCCTCATTTATTT TCTTCAAACTAAAAAAGAAAAAATACACAATAAAAAAGAGCAAATATATAATAACGCAACCCAAACTCCAATTATCAATC CCCAAAAAGTTCCAAAAATACCAAACAACAATATTTACCTTCCATTAACCAAAAATCAAAACAGCATTTCTATTTTAAAT GATTACATCATCTTTGAAGTTTTGCCAACAAAAAAAGCTTCCAATGAAGGAGAGCTAAATGCAAATCAAAAACTCAAATA TTTTTATGATAACGAAGGCAAAATAATCTCTTTACAATACTATAATCGCGATGGAAGTGATGAACACAAATGCGATTTAA TTTACAACAAGAATGACAAAATAAAAGAAAAAAAATGTTATCTTGAAAATATATACGATAAAAAATACACATACACATAT AATGAATTAGGGCAAATTATCGTCAAAGAAGAAGAAAATCCACAATCAAATAATAATTTTAAATATGAATATAATTACAA TAATTTAAATCAATTGACGACTTTGCAACAATATTTTCCGGATGGTGTTAAAGGATTAAAATTTAATTATGTTTATCAGT CTTCTAATTAA
Upstream 100 bases:
>100_bases CTTTGGAAAAAGTTCAATAATTTTAAAACCCAAAGTTGTCTCAAAAAATAAAACAACAAACTTTTTAATTTATTTACAAA CCTCAAGAAAGAACAACAAA
Downstream 100 bases:
>100_bases AAAATAGAAAAAAACCAACAAAATCTAATTATTTTTTTAGGTTATAAAAATAGAGTCTTTGCAACAAGACTCTTTTTTTT AATATAAAACAATAATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MNNNSKRKKICFIALFLLVLITSLIYFLQTKKEKIHNKKEQIYNNATQTPIINPQKVPKIPNNNIYLPLTKNQNSISILN DYIIFEVLPTKKASNEGELNANQKLKYFYDNEGKIISLQYYNRDGSDEHKCDLIYNKNDKIKEKKCYLENIYDKKYTYTY NELGQIIVKEEENPQSNNNFKYEYNYNNLNQLTTLQQYFPDGVKGLKFNYVYQSSN
Sequences:
>Translated_216_residues MNNNSKRKKICFIALFLLVLITSLIYFLQTKKEKIHNKKEQIYNNATQTPIINPQKVPKIPNNNIYLPLTKNQNSISILN DYIIFEVLPTKKASNEGELNANQKLKYFYDNEGKIISLQYYNRDGSDEHKCDLIYNKNDKIKEKKCYLENIYDKKYTYTY NELGQIIVKEEENPQSNNNFKYEYNYNNLNQLTTLQQYFPDGVKGLKFNYVYQSSN >Mature_216_residues MNNNSKRKKICFIALFLLVLITSLIYFLQTKKEKIHNKKEQIYNNATQTPIINPQKVPKIPNNNIYLPLTKNQNSISILN DYIIFEVLPTKKASNEGELNANQKLKYFYDNEGKIISLQYYNRDGSDEHKCDLIYNKNDKIKEKKCYLENIYDKKYTYTY NELGQIIVKEEENPQSNNNFKYEYNYNNLNQLTTLQQYFPDGVKGLKFNYVYQSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25640; Mature: 25640
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNSKRKKICFIALFLLVLITSLIYFLQTKKEKIHNKKEQIYNNATQTPIINPQKVPKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC PNNNIYLPLTKNQNSISILNDYIIFEVLPTKKASNEGELNANQKLKYFYDNEGKIISLQY CCCCEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE YNRDGSDEHKCDLIYNKNDKIKEKKCYLENIYDKKYTYTYNELGQIIVKEEENPQSNNNF ECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHCEEEEECCCCCCCCCCE KYEYNYNNLNQLTTLQQYFPDGVKGLKFNYVYQSSN EEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEECCC >Mature Secondary Structure MNNNSKRKKICFIALFLLVLITSLIYFLQTKKEKIHNKKEQIYNNATQTPIINPQKVPKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC PNNNIYLPLTKNQNSISILNDYIIFEVLPTKKASNEGELNANQKLKYFYDNEGKIISLQY CCCCEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE YNRDGSDEHKCDLIYNKNDKIKEKKCYLENIYDKKYTYTYNELGQIIVKEEENPQSNNNF ECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHCEEEEECCCCCCCCCCE KYEYNYNNLNQLTTLQQYFPDGVKGLKFNYVYQSSN EEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA