| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is yeaZ [C]
Identifier: 197294341
GI number: 197294341
Start: 255103
End: 255747
Strand: Direct
Name: yeaZ [C]
Synonym: PAa_0216
Alternate gene names: 197294341
Gene position: 255103-255747 (Clockwise)
Preceding gene: 197294340
Following gene: 197294343
Centisome position: 28.99
GC content: 26.67
Gene sequence:
>645_bases TTGATAATTCTAAACCCTAAACTTTACAACAATTTTTTTATAATAAAAAACTTAAGAAAGCATTTTTTTATGATTGCAAA AAAACTTTTAATTTTGGATACTTCTACCAAAGCTCAAATAATTATTTTTTCAAATAATAATCAAATTAAAACCTTACAAA AAAAACTTTTTGTAAAAGATTATGTTGCCTCTATTGTCCCTTTGATTGATCAAGTTTTACAAGCTAACAAAATCACTTTA AAAGAAATTGATGCTTTAATTGTTGGCGTAGGTCCTGGTTCTTATACAGGGACAAGAGTGGCTGTATTAACGGCCAAAAT GCTTTCTTTAAGTTTACAAATCCCTTTATATCAAATTAGCAGTTTACTTCTTTTAACTAGTGGTTATGATTTTCATTCTT TCACTCCTTTAATTGATGCTAGAAATGATGCTTTTTTTGCTTTAAATATTCACAATAATCAAATTCGTTTAAAAGAAAGC CGTTATCATTCTTCTTTTTTGGAAACTTTTTCCAATCATTTATTAATTACTCCTCAAACTATTAAAATCGCACTTGCTCC TCTTTTTCAGTTTATGAAAAAAGTGCCAAACCCTCATTTATTAGTTCCTAATTATCTTCTTTCAATTCAATCACAAAAAG AATAA
Upstream 100 bases:
>100_bases AACAAAAAACAAAGAAAAATTACAATAAAGCAAATAAAAAACTAAATAAAAAAATATTTTATTTTAAACAACTTTTTACT TTTTTAACTTCTCCAAAAGA
Downstream 100 bases:
>100_bases TTAATTTATGTCAAACTACCTTATATTATAAAAAAAGAGTCTTGTTACAAAGACTCTATTTTGTTATCGTAAGACATTTT TTTGCTTTATTAAACTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIILNPKLYNNFFIIKNLRKHFFMIAKKLLILDTSTKAQIIIFSNNNQIKTLQKKLFVKDYVASIVPLIDQVLQANKITL KEIDALIVGVGPGSYTGTRVAVLTAKMLSLSLQIPLYQISSLLLLTSGYDFHSFTPLIDARNDAFFALNIHNNQIRLKES RYHSSFLETFSNHLLITPQTIKIALAPLFQFMKKVPNPHLLVPNYLLSIQSQKE
Sequences:
>Translated_214_residues MIILNPKLYNNFFIIKNLRKHFFMIAKKLLILDTSTKAQIIIFSNNNQIKTLQKKLFVKDYVASIVPLIDQVLQANKITL KEIDALIVGVGPGSYTGTRVAVLTAKMLSLSLQIPLYQISSLLLLTSGYDFHSFTPLIDARNDAFFALNIHNNQIRLKES RYHSSFLETFSNHLLITPQTIKIALAPLFQFMKKVPNPHLLVPNYLLSIQSQKE >Mature_214_residues MIILNPKLYNNFFIIKNLRKHFFMIAKKLLILDTSTKAQIIIFSNNNQIKTLQKKLFVKDYVASIVPLIDQVLQANKITL KEIDALIVGVGPGSYTGTRVAVLTAKMLSLSLQIPLYQISSLLLLTSGYDFHSFTPLIDARNDAFFALNIHNNQIRLKES RYHSSFLETFSNHLLITPQTIKIALAPLFQFMKKVPNPHLLVPNYLLSIQSQKE
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=125, Percent_Identity=28, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 24385; Mature: 24385
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILNPKLYNNFFIIKNLRKHFFMIAKKLLILDTSTKAQIIIFSNNNQIKTLQKKLFVKD CEEECCCHHCCEEEEHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCHHHHHHHHHHHH YVASIVPLIDQVLQANKITLKEIDALIVGVGPGSYTGTRVAVLTAKMLSLSLQIPLYQIS HHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHEEECCHHHHH SLLLLTSGYDFHSFTPLIDARNDAFFALNIHNNQIRLKESRYHSSFLETFSNHLLITPQT HHHHEECCCCCCCCCCEEECCCCEEEEEEEECCEEEEEHHHHHHHHHHHHCCCEEECCHH IKIALAPLFQFMKKVPNPHLLVPNYLLSIQSQKE HHHHHHHHHHHHHHCCCCCEECCHHEEEECCCCC >Mature Secondary Structure MIILNPKLYNNFFIIKNLRKHFFMIAKKLLILDTSTKAQIIIFSNNNQIKTLQKKLFVKD CEEECCCHHCCEEEEHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCHHHHHHHHHHHH YVASIVPLIDQVLQANKITLKEIDALIVGVGPGSYTGTRVAVLTAKMLSLSLQIPLYQIS HHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHEEECCHHHHH SLLLLTSGYDFHSFTPLIDARNDAFFALNIHNNQIRLKESRYHSSFLETFSNHLLITPQT HHHHEECCCCCCCCCCEEECCCCEEEEEEEECCEEEEEHHHHHHHHHHHHCCCEEECCHH IKIALAPLFQFMKKVPNPHLLVPNYLLSIQSQKE HHHHHHHHHHHHHHCCCCCEECCHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]