Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is 197294326

Identifier: 197294326

GI number: 197294326

Start: 234522

End: 234983

Strand: Direct

Name: 197294326

Synonym: PAa_0197

Alternate gene names: NA

Gene position: 234522-234983 (Clockwise)

Preceding gene: 197294325

Following gene: 197294327

Centisome position: 26.65

GC content: 28.79

Gene sequence:

>462_bases
ATGAATTATCAAAAAACTTTTTATTACCTTGATGGCAAAACAAAGAAATCTGTTGTTGAATACTACTCAGATGGGGAAAC
AATATATTACATCACTGAATATCACCCTAAAACAGAAGAAGTAATTAAACAAACAAATTATAATTCTGATGGTAAATTAA
CCACAGAAATTTTTTATGATGGCGATGGCAAAACAATTTATGTCATCCGAGAATACAACCCCCAAATAAGTAAATTAATT
AAATTTACTAAATACCGAGAAGATGGTGAAACAATTGACTATATTACAGAATTTAAGTACCATCCCAAAACAAACAAATT
AATTAAAACAACTGGTTTTTCCTTCGATCGCAAAAGAATAGCTTTTATATACAAACACCATCCTAATGGTAAATTGTTTA
AAAGAACTTACTACAACTCCGATGGAACAATCATAAAAGAAAGGAGCAAAAACAATGACTAA

Upstream 100 bases:

>100_bases
AAACAACAAAAAAATATTAATCATTCATAAAAAAATTTAGAACAAATAATTAAAACTTTAATCAATAAAAAAATATTTTA
ATTAAAGGAGAAAAATAATT

Downstream 100 bases:

>100_bases
AAAAGAATTAATTAAAAACATCGCAGTAATGAATAACACTTCGGTTACTCAAACTCAAGATTTTTACAATTCGTTTGAAA
ATGCTTTAATTGAAGCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPKTEEVIKQTNYNSDGKLTTEIFYDGDGKTIYVIREYNPQISKLI
KFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRIAFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND

Sequences:

>Translated_153_residues
MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPKTEEVIKQTNYNSDGKLTTEIFYDGDGKTIYVIREYNPQISKLI
KFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRIAFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND
>Mature_153_residues
MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPKTEEVIKQTNYNSDGKLTTEIFYDGDGKTIYVIREYNPQISKLI
KFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRIAFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18385; Mature: 18385

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPKTEEVIKQTNYNSDGKLTTEIFYD
CCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEEC
GDGKTIYVIREYNPQISKLIKFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRI
CCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCEE
AFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND
EEEEEECCCCCEEEEEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MNYQKTFYYLDGKTKKSVVEYYSDGETIYYITEYHPKTEEVIKQTNYNSDGKLTTEIFYD
CCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEEEC
GDGKTIYVIREYNPQISKLIKFTKYREDGETIDYITEFKYHPKTNKLIKTTGFSFDRKRI
CCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCEE
AFIYKHHPNGKLFKRTYYNSDGTIIKERSKNND
EEEEEECCCCCEEEEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA