| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294295
Identifier: 197294295
GI number: 197294295
Start: 189286
End: 189981
Strand: Direct
Name: 197294295
Synonym: PAa_0158
Alternate gene names: NA
Gene position: 189286-189981 (Clockwise)
Preceding gene: 197294294
Following gene: 197294301
Centisome position: 21.51
GC content: 30.75
Gene sequence:
>696_bases ATGGCCAAAAAGAAAGGAATTTTTATGCAATCTAAACAATTTTTTTCAAAAGAAAAGAAAAATTTTTTAATTGGAGTTGG TTTTTTACTGCTTTTAATTTTAACACTTGCAACACTCATCACAAGTCTATGTATTTATTTTGGCTTAGCTAATAAAACTA ATAATAAAACCCCATCCACCCATTATAACTCAGACGATTTAAAGACAATCGCTGAACGCTACCCAATTTCAAGCAAAAAA ATCAAATACATCAATTACAAAAAAGATACCACAATTAAGGATTTCTTTGAATGTAACAAAAGAAAGGGTAAACGAATCAA ATCAATTATTTACCTCAATGGCGCAATTGATTGGATCTCTGAATATGACAAAAAAACAAGAAAACGAATCAAATCTACCC ATTATAAACCAGATGGAAAAGTTGATTACAGCTTTGAATATGACCCTGAAACACGCAACAAAATCAAATATACCGATTAT AACATCGATGGCACAATTAAGGAAATCTTGGAATACGACAAAATAACAAATAAACGCACCAAATCAACCTATTACAACAA AGAAGGATTAGTTGGTTTAATTTTTGAATCAGACCCACAAACAGGAAACATAACCAAATCAATCTATTACAACGAAAATG GCTCAATCCAAAGAATCTATGAATACGACCCCCAAACAGGCAATGAAACCAAATAA
Upstream 100 bases:
>100_bases ATTTTATTAAATAAAGAATCCATTAATTTAGAAATAAATTTATTAAATCATCAAATAAAAGTTTTAGACAAAAAACTAAT TTTAGATTTGCAATGGTAAA
Downstream 100 bases:
>100_bases AATCCTCATCTCAAACGCCTTTTAAACGAAAATAAATGGGCACATTCCGCCGTTAAAATTATTTTTTTAAGTCAATATAT ATATCTTTAACTTATAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAKKKGIFMQSKQFFSKEKKNFLIGVGFLLLLILTLATLITSLCIYFGLANKTNNKTPSTHYNSDDLKTIAERYPISSKK IKYINYKKDTTIKDFFECNKRKGKRIKSIIYLNGAIDWISEYDKKTRKRIKSTHYKPDGKVDYSFEYDPETRNKIKYTDY NIDGTIKEILEYDKITNKRTKSTYYNKEGLVGLIFESDPQTGNITKSIYYNENGSIQRIYEYDPQTGNETK
Sequences:
>Translated_231_residues MAKKKGIFMQSKQFFSKEKKNFLIGVGFLLLLILTLATLITSLCIYFGLANKTNNKTPSTHYNSDDLKTIAERYPISSKK IKYINYKKDTTIKDFFECNKRKGKRIKSIIYLNGAIDWISEYDKKTRKRIKSTHYKPDGKVDYSFEYDPETRNKIKYTDY NIDGTIKEILEYDKITNKRTKSTYYNKEGLVGLIFESDPQTGNITKSIYYNENGSIQRIYEYDPQTGNETK >Mature_230_residues AKKKGIFMQSKQFFSKEKKNFLIGVGFLLLLILTLATLITSLCIYFGLANKTNNKTPSTHYNSDDLKTIAERYPISSKKI KYINYKKDTTIKDFFECNKRKGKRIKSIIYLNGAIDWISEYDKKTRKRIKSTHYKPDGKVDYSFEYDPETRNKIKYTDYN IDGTIKEILEYDKITNKRTKSTYYNKEGLVGLIFESDPQTGNITKSIYYNENGSIQRIYEYDPQTGNETK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27057; Mature: 26926
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKGIFMQSKQFFSKEKKNFLIGVGFLLLLILTLATLITSLCIYFGLANKTNNKTPST CCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC HYNSDDLKTIAERYPISSKKIKYINYKKDTTIKDFFECNKRKGKRIKSIIYLNGAIDWIS CCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHH EYDKKTRKRIKSTHYKPDGKVDYSFEYDPETRNKIKYTDYNIDGTIKEILEYDKITNKRT HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHH KSTYYNKEGLVGLIFESDPQTGNITKSIYYNENGSIQRIYEYDPQTGNETK HHHEECCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure AKKKGIFMQSKQFFSKEKKNFLIGVGFLLLLILTLATLITSLCIYFGLANKTNNKTPST CCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC HYNSDDLKTIAERYPISSKKIKYINYKKDTTIKDFFECNKRKGKRIKSIIYLNGAIDWIS CCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHH EYDKKTRKRIKSTHYKPDGKVDYSFEYDPETRNKIKYTDYNIDGTIKEILEYDKITNKRT HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHH KSTYYNKEGLVGLIFESDPQTGNITKSIYYNENGSIQRIYEYDPQTGNETK HHHEECCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA