| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294281
Identifier: 197294281
GI number: 197294281
Start: 172615
End: 172797
Strand: Reverse
Name: 197294281
Synonym: PAa_0144
Alternate gene names: NA
Gene position: 172797-172615 (Counterclockwise)
Preceding gene: 197294283
Following gene: 197294280
Centisome position: 19.64
GC content: 20.22
Gene sequence:
>183_bases TTGAAATATTTAATTTTATGTAGCAAACAGCTCGCAGTTTCAAAAAAACAAATCCTTTTTTTCAAAAACAACCGAAAAAA AACAACCGAAAAAGTAAAAATAAAATTAATAATGAATACGATAAAAAAAATTTATAAATGTTTTAAAACCAACTGTAAAA TTAATCAAATTAGCCAAAAATAA
Upstream 100 bases:
>100_bases TACAAAAACTTAAATTTTTAATTTATTATAAAAAAATTTAAAAGTTTTATATGAATCGAGTCATAAAAAAGACTCATGAA AAAGGAATTGATGAAGAAAT
Downstream 100 bases:
>100_bases AAAAGGAAAAAGCATATGATTCAAAAAGCAAATTTTATTCGCAGCATTGAAAACATCAAGGACCAACCTTTAGAAAATTA TCCAGAAATCATTTTAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MKYLILCSKQLAVSKKQILFFKNNRKKTTEKVKIKLIMNTIKKIYKCFKTNCKINQISQK
Sequences:
>Translated_60_residues MKYLILCSKQLAVSKKQILFFKNNRKKTTEKVKIKLIMNTIKKIYKCFKTNCKINQISQK >Mature_60_residues MKYLILCSKQLAVSKKQILFFKNNRKKTTEKVKIKLIMNTIKKIYKCFKTNCKINQISQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7183; Mature: 7183
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLILCSKQLAVSKKQILFFKNNRKKTTEKVKIKLIMNTIKKIYKCFKTNCKINQISQK CCEEEEECCCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKYLILCSKQLAVSKKQILFFKNNRKKTTEKVKIKLIMNTIKKIYKCFKTNCKINQISQK CCEEEEECCCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA