| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is engB [H]
Identifier: 197294280
GI number: 197294280
Start: 172021
End: 172599
Strand: Reverse
Name: engB [H]
Synonym: PAa_0143
Alternate gene names: 197294280
Gene position: 172599-172021 (Counterclockwise)
Preceding gene: 197294281
Following gene: 197294279
Centisome position: 19.61
GC content: 26.94
Gene sequence:
>579_bases ATGATTCAAAAAGCAAATTTTATTCGCAGCATTGAAAACATCAAGGACCAACCTTTAGAAAATTATCCAGAAATCATTTT AATGGGTAGAAGTAATGTTGGAAAAAGTTCTTTTATCAATGCTTTAACTCAAAGAAAAAAATTAGCCAAAACTTCGCAAA CTCCAGGAAAAACAATAACTTTAAATTATTATTATGTCAATGACTCATTTTATTTAATTGATACTCCAGGTTATGGTTAT TCTAAAAGAAGCAAAAGTATTCAAAAGCAATTTTTACCAATGATTATATCTTTTCTGGAACAAAGTAATCGTTTAAAGGC GATATTTCAGCTAATTGATTTTAAAATAGGGCCGACTCAAGAAGACGATAGAATTCATCAAGCTCTTCTTAAAGCACAAT TTGAAGTAATTATCGTATTTGTTAAAAAAGATCAAGTAAAAAAAACCACTCAACCAAACCAATTGAAAAAATTAATCAAT CATTTTACTAATATTAAACGTTTTTTTTTAGTATCTTCGGCGAAAAAAGAAGGATTTAAAGATTTAACAGATTTTCTTCT TTCTTTAGTCACAAATTAA
Upstream 100 bases:
>100_bases AATAAAATTAATAATGAATACGATAAAAAAAATTTATAAATGTTTTAAAACCAACTGTAAAATTAATCAAATTAGCCAAA AATAAAAAAGGAAAAAGCAT
Downstream 100 bases:
>100_bases ATTATAGAATTTTTTTATTCTTTTTTTGAAAATTCAAAACAAAAATATAAATGTTAAAAAAATAAAAAAAGGATACTTTT ATGAAAAAGAAATATGATTT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MIQKANFIRSIENIKDQPLENYPEIILMGRSNVGKSSFINALTQRKKLAKTSQTPGKTITLNYYYVNDSFYLIDTPGYGY SKRSKSIQKQFLPMIISFLEQSNRLKAIFQLIDFKIGPTQEDDRIHQALLKAQFEVIIVFVKKDQVKKTTQPNQLKKLIN HFTNIKRFFLVSSAKKEGFKDLTDFLLSLVTN
Sequences:
>Translated_192_residues MIQKANFIRSIENIKDQPLENYPEIILMGRSNVGKSSFINALTQRKKLAKTSQTPGKTITLNYYYVNDSFYLIDTPGYGY SKRSKSIQKQFLPMIISFLEQSNRLKAIFQLIDFKIGPTQEDDRIHQALLKAQFEVIIVFVKKDQVKKTTQPNQLKKLIN HFTNIKRFFLVSSAKKEGFKDLTDFLLSLVTN >Mature_192_residues MIQKANFIRSIENIKDQPLENYPEIILMGRSNVGKSSFINALTQRKKLAKTSQTPGKTITLNYYYVNDSFYLIDTPGYGY SKRSKSIQKQFLPMIISFLEQSNRLKAIFQLIDFKIGPTQEDDRIHQALLKAQFEVIIVFVKKDQVKKTTQPNQLKKLIN HFTNIKRFFLVSSAKKEGFKDLTDFLLSLVTN
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=196, Percent_Identity=29.0816326530612, Blast_Score=77, Evalue=6e-15, Organism=Escherichia coli, GI145693205, Length=183, Percent_Identity=29.5081967213115, Blast_Score=99, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320543, Length=138, Percent_Identity=34.7826086956522, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 22248; Mature: 22248
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKANFIRSIENIKDQPLENYPEIILMGRSNVGKSSFINALTQRKKLAKTSQTPGKTIT CCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE LNYYYVNDSFYLIDTPGYGYSKRSKSIQKQFLPMIISFLEQSNRLKAIFQLIDFKIGPTQ EEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC EDDRIHQALLKAQFEVIIVFVKKDQVKKTTQPNQLKKLINHFTNIKRFFLVSSAKKEGFK CHHHHHHHHHHHHHEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DLTDFLLSLVTN HHHHHHHHHHCC >Mature Secondary Structure MIQKANFIRSIENIKDQPLENYPEIILMGRSNVGKSSFINALTQRKKLAKTSQTPGKTIT CCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE LNYYYVNDSFYLIDTPGYGYSKRSKSIQKQFLPMIISFLEQSNRLKAIFQLIDFKIGPTQ EEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC EDDRIHQALLKAQFEVIIVFVKKDQVKKTTQPNQLKKLINHFTNIKRFFLVSSAKKEGFK CHHHHHHHHHHHHHEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DLTDFLLSLVTN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA